PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG038820.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 316aa MW: 33644.8 Da PI: 5.2439 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.9 | 2e-14 | 97 | 148 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++++ + a+i+ A++++k+L+ TRIDC5AG038820.2 97 QRMTHIAVERNRRKQMNEYLAALRSLMPPS---YAQRGDQASIVGGAINFVKELE 148 79****************************...*******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
GLFGGGEGLA GLDGGDWDAA VAAACSSMLL PQAAFQELDI SAVAATAAPQ EESGGRGEMS 60 AAGVGQDDAA PVAAAATGRR KRRRTRMAKN SEEVESQRMT HIAVERNRRK QMNEYLAALR 120 SLMPPSYAQR GDQASIVGGA INFVKELEQL LQTLETHRQA RERAAAVDGG EAPPPPFANF 180 FTFPQYSMSA TPAPAPAPPA NNDEGADGCA EAEASGSKPS AVADVEVTMV ESHANLRMLS 240 RRRPRQLLRL LVGLQGHRLT VLHLNMSSAG HMVLYSLSLK VEDDCQLTSV DEIATAAHQI 300 VEKIQEEQEL TARCSM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 80 | 84 | RKRRR |
2 | 80 | 85 | RKRRRT |
3 | 98 | 109 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 2e-43 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG038820.2 |