PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG038820.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 315aa MW: 33423.5 Da PI: 5.094

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG038820.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45	2e-14	98	149	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++++ + a+i+ A++++k+L+ TRIDC5AG038820.1 98 QRMTHIAVERNRRKQMNEYLAALRSLMPPS---YAQRGDQASIVGGAINFVKELE 149 79**************************...*****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
NGLFGGGEGL AGLDGGDWDA AVAAACSSML LPQAAFQELD ISAVAATAAP QEESGGRGEM 60 SAAGVGQDDA APVAAAATGR RKRRRTRMAK NSEEVESQRM THIAVERNRR KQMNEYLAAL 120 RSLMPPSYAQ RGDQASIVGG AINFVKELEQ LLQTLETHRQ ARERAAAVDG GEAPPPPFAN 180 FFTFPQYSMS ATPAPAPAPP ANNDEGADGC AEAEASGSKP SAVADVEVTM VESHANLRML 240 SRRRPRQLLR LLVGLQGHRL TVLHLNMSSA GHMVLYSLSL KVEDDCQLTS VDEIATAAHQ 300 IVEKIQEEQE LTAAA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	81	85	RKRRR
2	81	86	RKRRRT
3	99	110	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-43	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG038820.1