PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG037550.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 235aa MW: 25094.5 Da PI: 6.6031 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25.3 | 2.7e-08 | 161 | 201 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P +K++ a++L +A++Y+k L TRIDC5AG037550.2 161 ARLRRERISERIRVLQRLVPGG-----TKMDTASMLDEAIHYVKFL 201 699*****************87.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MDFDLLLGSS PEAQLALMNT MLQLEQVLND QSLMMAEASP PISPVQTPSH SLSPPPHVST 60 ACAAADAGYF YHQDLHAQAA PAGYAGTGGV HQEYVVSPGA AVFDGAGGAP QGYSSPSSSD 120 AMREMIFHIA ALQPVEVDPE AVRPPKRRNV RTSKDPQSVA ARLRRERISE RIRVLQRLVP 180 GGTKMDTASM LDEAIHYVKF LKSQVQSLEL AAAATGAAAH RAVAFAYPAM QHAPW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 143 | 148 | RPPKRR |
2 | 162 | 167 | RLRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50330.1 | 6e-43 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG037550.2 |