PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG033180.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 322aa    MW: 36243.9 Da    PI: 8.3489
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG033180.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR145.82e-14149228190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn Y+ e+GF +r  ks+ + + +   +++ vC ++gk+e+++++         + r++C a++++ +  d+ w++++ +  HnH+l+
  TRIDC5AG033180.7 149 DFYNLYSWELGFGIRYGKSRLNVERT-KCMQEIVCGCSGKPEQQNSR---------SCRCECPAMVRLLRAADNGWYIAEHRASHNHSLS 228
                       6*****************99995544.67899********9987655.........99*****************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
TMCAEELQNG LEFLLDPVDR FPLNEVTADV ERPDPLVLVD VRRSAPATAD SSSASVFGHI  60
GASTHHVRSP CKRPLSPTKS AESTGKVNPE APGRTRRLRI GRAPLDRVPC AGRVTPLEET  120
IRRYADKPTE SVVKPQIGMS FDSLGEAYDF YNLYSWELGF GIRYGKSRLN VERTKCMQEI  180
VCGCSGKPEQ QNSRSCRCEC PAMVRLLRAA DNGWYIAEHR ASHNHSLSLT CGEKVHWPSH  240
KHTDVYTKDL VKQLRENNLN LNKVYSIVGS FFGSTQSVPF TKRSLRNLCE RISRDQADDD  300
VNKTLAVFKE IQQNDPEFTY RV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.11e-10FAR1 family protein