PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG033180.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 338aa MW: 37899.8 Da PI: 8.2095

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG033180.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.7	2.2e-14	165	244	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF +r ks+ + + + +++ vC ++gk+e+++++ + r++C a++++ + d+ w++++ + HnH+l+ TRIDC5AG033180.2 165 DFYNLYSWELGFGIRYGKSRLNVERT-KCMQEIVCGCSGKPEQQNSR---------SCRCECPAMVRLLRAADNGWYIAEHRASHNHSLS 244 6***************99995544.67899****9987655.........99***************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
QVKTAQVPQM AEEGSATMCA EELQNGLEFL LDPVDRFPLN EVTADVERPD PLVLVDVRRS 60 APATADSSSA SVFGHIGAST HHVRSPCKRP LSPTKSAEST GKVNPEAPGR TRRLRIGRAP 120 LDRVPCAGRV TPLEETIRRY ADKPTESVVK PQIGMSFDSL GEAYDFYNLY SWELGFGIRY 180 GKSRLNVERT KCMQEIVCGC SGKPEQQNSR SCRCECPAMV RLLRAADNGW YIAEHRASHN 240 HSLSLTCGEK VHWPSHKHTD VYTKDLVKQL RENNLNLNKV YSIVGSFFGS TQSVPFTKRS 300 LRNLCERISR DQADDDVNKT LAVFKEIQQN DPEFTYRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	2e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG033180.2