PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5AG032110.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 840aa MW: 95699.8 Da PI: 6.9481

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG032110.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.9	2.2e-25	88	176	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY +YA +vGFsvr+++s+ksk +++i++ +fvCskeg+++e++ +k+r++ a+ r gC+a+l+v ++ d+kw+ tkl++eHnHe+ TRIDC5AG032110.5 88 FYIAYAGRVGFSVRIARSRKSKCSESIIMLRFVCSKEGFSKEKRVVeGKKTRKRLASIREGCNAMLEVLRRGDNKWVATKLVKEHNHEV 176 9************************************999876635677778899****************************96 PP
2	FAR1	63.7	5.2e-20	210	296	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY +YA ++GF+vr+++s+ks ++++ ++ ++vCs++ +++ ++++ ++r +r gC+a +++ ++++g+w+v+kl leH+Hel+p TRIDC5AG032110.5 210 FYYSYAIRAGFEVRVRQSRKS-QDESLKMLKLVCSRHRYHSGRENN--GDDTKRDPSRDGCNALFEIIRKDKGVWRVSKLILEHSHELNP 296 9*****************9.6777***********99988..88899999*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 840 aa Download sequence
MMEPQGVELE DDSIDFWASL GVSTHVHGVD QMALHSVHIL DHQGQSLPPA VVSHPESVCK 60 ELFPVEADPC LEPRVGMEFE SGEAAKTFYI AYAGRVGFSV RIARSRKSKC SESIIMLRFV 120 CSKEGFSKEK RVVEGKKTRK RLASIREGCN AMLEVLRRGD NKWVATKLVK EHNHEVGMPS 180 TVHYIATESD TMVDPYIDME FESLESAKTF YYSYAIRAGF EVRVRQSRKS QDESLKMLKL 240 VCSRHRYHSG RENNGDDTKR DPSRDGCNAL FEIIRKDKGV WRVSKLILEH SHELNPAPAS 300 SVCCVRSQGE VLVIAKNFAD TRNLLLNGQD SQPHREIRYN DLGPEDAQSL LEYLKKVQAE 360 DPAFFYAVQL DKHEDTVNIF WADASARMAY YHFGDAVRFE TAYRSNKEHI PIVIFSGVNH 420 HVQPVIFGCA LLVDESEESF VWLFEKWLEA MHVRPPVSFV TELNQEMAAA AAKVLPDTCH 480 IFCEKHILGT VKEELHSIYP GLDHFITDLR KCIDGCRIEE SFESCWESVL IKHGFRNNEH 540 LQSLYDIRER WAPAYTKQSF HARNLLAQSC QNLEKIIDTY FSSKTQLVVA VQQLEQAICN 600 FHAKEAQVDY LTMFQPPALR TASPVEKQAG LVFSRKVFDI FQEQFAESFG YHAERLEDRM 660 LHKYRLTVDD GDEEAHIVSF SPDQSTVCCS CCLFESCGIL CRHALRVFII EGVRFLPKAY 720 VLKRWTKHAK STVTLDNYIE LRGYCEDPST SRYNDLCYDA NKCAKEGSTS TERYKIAKEA 780 LCKALDEIMP TRNIREQNSQ NCTTSLRSPV KKLGTSKGTS GKSIKRPAFK NSLVESNGSR

Sequence ? help Back to Top

Protein Sequence Length: 840 aa Download sequence

MMEPQGVELE DDSIDFWASL GVSTHVHGVD QMALHSVHIL DHQGQSLPPA VVSHPESVCK  60
ELFPVEADPC LEPRVGMEFE SGEAAKTFYI AYAGRVGFSV RIARSRKSKC SESIIMLRFV  120
CSKEGFSKEK RVVEGKKTRK RLASIREGCN AMLEVLRRGD NKWVATKLVK EHNHEVGMPS  180
TVHYIATESD TMVDPYIDME FESLESAKTF YYSYAIRAGF EVRVRQSRKS QDESLKMLKL  240
VCSRHRYHSG RENNGDDTKR DPSRDGCNAL FEIIRKDKGV WRVSKLILEH SHELNPAPAS  300
SVCCVRSQGE VLVIAKNFAD TRNLLLNGQD SQPHREIRYN DLGPEDAQSL LEYLKKVQAE  360
DPAFFYAVQL DKHEDTVNIF WADASARMAY YHFGDAVRFE TAYRSNKEHI PIVIFSGVNH  420
HVQPVIFGCA LLVDESEESF VWLFEKWLEA MHVRPPVSFV TELNQEMAAA AAKVLPDTCH  480
IFCEKHILGT VKEELHSIYP GLDHFITDLR KCIDGCRIEE SFESCWESVL IKHGFRNNEH  540
LQSLYDIRER WAPAYTKQSF HARNLLAQSC QNLEKIIDTY FSSKTQLVVA VQQLEQAICN  600
FHAKEAQVDY LTMFQPPALR TASPVEKQAG LVFSRKVFDI FQEQFAESFG YHAERLEDRM  660
LHKYRLTVDD GDEEAHIVSF SPDQSTVCCS CCLFESCGIL CRHALRVFII EGVRFLPKAY  720
VLKRWTKHAK STVTLDNYIE LRGYCEDPST SRYNDLCYDA NKCAKEGSTS TERYKIAKEA  780
LCKALDEIMP TRNIREQNSQ NCTTSLRSPV KKLGTSKGTS GKSIKRPAFK NSLVESNGSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-120	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG032110.5