PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG031190.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 350aa    MW: 39444.5 Da    PI: 7.0971
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG031190.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.14.9e-0693113626
                        -SGGGGTS--TTTTT-SS-SS CS
            zf-CCCH   6 CrffartGtCkyGdrCkFaHg 26 
                        C +f+  G C +G+ C+FaH+
  TRIDC5AG031190.11  93 CFDFLNKGKCERGPECRFAHS 113
                        6678888*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MSSADIHARP PNATLSPYAA PAKSVHAEDT PKRPAESTDL QYWRYDVKRQ RQGQTDGSLL  60
CFKYTSSGSC PRGSKCNFRH DEEAREHCQR NVCFDFLNKG KCERGPECRF AHSLTEEAAA  120
RDAKPRSERR RVESSCWFCL SSPDVESHLV ISIGDGYYCA LAKGPLVPDH VLVIPVEHFP  180
TTIAMPVEPE AELRRYKDSL GKYFEKRGKA AVYFEWVSQQ SRHANLQAVP VPLSKAANVK  240
KIFHLAAQRL GFEFSVVNPD GDANQGRELL RSQYDGKSGL FYVELPDGTL LLHIIDSGEK  300
FPAQFGREVL AGLLSMADRA DWRNCKLSKE EEVKMVDDFK QGFHEFDPAE