PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG031190.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 328aa    MW: 36692.4 Da    PI: 8.0629
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG031190.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.24.6e-06194214626
                        -SGGGGTS--TTTTT-SS-SS CS
            zf-CCCH   6 CrffartGtCkyGdrCkFaHg 26 
                        C +f+  G C +G+ C+FaH+
  TRIDC5AG031190.10 194 CFDFLNKGKCERGPECRFAHS 214
                        6678888*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
VPLTIMRCTN EWPAGVVDGA DTSKVPPQVL DPQGYDPVVA ELVAEIKPRY HIAGTKGVFY  60
AREPYVNDSS PHVTRFIGLA NVGNKEKQKF IHAISPTPAS TMSSADIHAR PPNATLSPYA  120
APAKSVHAED TPKRPAESTD LQYWRYDVKR QRQGQTDGSL LCFKYTSSGS CPRGSKCNFR  180
HDEEAREHCQ RNVCFDFLNK GKCERGPECR FAHSLTEEAA ARDAKPRSER RRVESSCWFC  240
LSSPDVESHL VISIGDGYYC ALAKGPLVPD HVLVIPVEHF PTTIAMPVEP EAELRRYKDS  300
LGKYFEKRGK AAVYFEWVSQ QSRHANLQ