PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5AG030860.12

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 541aa MW: 61634.4 Da PI: 9.8594

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG030860.12	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.1	0.00077	451	480	1	30
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 1 rrrahnerErrRRdriNsafeeLrellPka 30 rr+++ +E +RR+ +N+ ++ Lr + k+ TRIDC5AG030860.12 451 RRAMARSIELQRREALNHHISVLRHKIWKL 480 7999********************999885 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MNYNLRCVQS YAKIAEVDSS ENAGDAIGVV PSSEEHDLQK PTVEHDLQKP VVERNSQKSS 60 AEDVKRSTSV MNFSQEATET FDINSFLDQL GPRYKDWSGR SPVPVDADLL PGLVPGYKPP 120 FRQLPYRTKI SLKDKEMTAL RRLARQTAPH FALGRNREHQ GLAAAIVKVW EKSSIVKIAI 180 KRGVPNTCND RMAEEIKKLT GGVLVSRNKE YINFYRGNDF VTPKVRKVLV EQQQHAITQQ 240 EQEELARLKA SASITPIPKA LKNPLVAGTL AETREATSRW GDSLNDELRK KENNRLILAK 300 HTSLLKNMKR KLILAKTKVA KAEMALAKVQ EYLSPAELPT DLETITDEER FLFRRIGLKM 360 KAFLMLGRRE VFDGTVQNMH FHWKHRELVK IVVKGKTFEQ VKHIAISLEA ESGGVLIALD 420 KTTKGYSIIF YRGKNYKRPQ VLKPRNLLTR RRAMARSIEL QRREALNHHI SVLRHKIWKL 480 KSQLVQMRAA GRKQDAELLQ TVEDDLSSDD DNIQDEGDEA YLQTYGSDDE DDADDDSNEY 540 L

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MNYNLRCVQS YAKIAEVDSS ENAGDAIGVV PSSEEHDLQK PTVEHDLQKP VVERNSQKSS  60
AEDVKRSTSV MNFSQEATET FDINSFLDQL GPRYKDWSGR SPVPVDADLL PGLVPGYKPP  120
FRQLPYRTKI SLKDKEMTAL RRLARQTAPH FALGRNREHQ GLAAAIVKVW EKSSIVKIAI  180
KRGVPNTCND RMAEEIKKLT GGVLVSRNKE YINFYRGNDF VTPKVRKVLV EQQQHAITQQ  240
EQEELARLKA SASITPIPKA LKNPLVAGTL AETREATSRW GDSLNDELRK KENNRLILAK  300
HTSLLKNMKR KLILAKTKVA KAEMALAKVQ EYLSPAELPT DLETITDEER FLFRRIGLKM  360
KAFLMLGRRE VFDGTVQNMH FHWKHRELVK IVVKGKTFEQ VKHIAISLEA ESGGVLIALD  420
KTTKGYSIIF YRGKNYKRPQ VLKPRNLLTR RRAMARSIEL QRREALNHHI SVLRHKIWKL  480
KSQLVQMRAA GRKQDAELLQ TVEDDLSSDD DNIQDEGDEA YLQTYGSDDE DDADDDSNEY  540
L

Link Out ? help Back to Top
Ensembl	TRIDC5AG030860.12