PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5AG025380.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 159aa MW: 17813.3 Da PI: 6.0848 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 119.7 | 1.7e-37 | 1 | 90 | 11 | 100 |
DUF260 11 kCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +Ca+dCv+apyfp e+p++fa vh++FGasnv+k+l++lp +r da+sslvyeA ar+rdPvyG++g i+ lqqq++ql+++la++++e TRIDC5AG025380.1 1 RCARDCVFAPYFPPEDPHRFATVHRVFGASNVSKMLQELPAAQRADAVSSLVYEATARMRDPVYGCAGAISYLQQQVSQLQVQLAVAQAE 90 6*************************************************************************************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 159 aa Download sequence |
RCARDCVFAP YFPPEDPHRF ATVHRVFGAS NVSKMLQELP AAQRADAVSS LVYEATARMR 60 DPVYGCAGAI SYLQQQVSQL QVQLAVAQAE ILQRINHPSP ASAFHLQELQ QRQVQQQQQM 120 QMDDDDKAYS SLVMQNDLMS TLLLQEACLK KDVSASVIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G30130.1 | 1e-43 | LBD family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5AG025380.1 |