PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG024190.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 577aa    MW: 61770.1 Da    PI: 6.3097
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG024190.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS407.81e-1242075682374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPilk 92 
                        +lLl+cAe v++++l +aq++L ++ ela+p g+++qR+aayf+eA +arl++s+ +ly+ lp  + + ++    +++aa+++f+ +sP++k
  TRIDC5AG024190.2 207 LTLLLQCAESVNADNLDEAQTALLEIAELATPFGTSTQRVAAYFAEAVSARLVSSCLGLYAPLPHASPAASRlvNGRVAAAFQVFNGISPLVK 299
                       579************************************************************7776666665677788999*********** PP

              GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185
                       fsh+taNqaI ea+e+eervHiiD+di+qGlQWp L++ LasRp+gpp++R+Tg+g+    s ++le+tg+rL++fA++lg+pfef + va++
  TRIDC5AG024190.2 300 FSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGA----SMDALEATGKRLSDFADTLGLPFEFCP-VADK 387
                       *********************************************************....***************************.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                         +l++e+L v ++Ea+aV++ +  h+l+d ++s ++    +L l+k+l Pkvv++veq++ h ++sFl+rf+ea++yysalfdsl+a+++++
  TRIDC5AG024190.2 388 AGNLDPEKLGVTRREAVAVHWLH--HSLYDVTGSDSN----TLCLIKRLAPKVVTMVEQDLRH-TGSFLARFVEAIHYYSALFDSLDASYGED 473
                       **********************9..999999999999....**********************.889************************** PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                       s er++vE++ll+rei+nv+a  g +r+ + + ++ Wr+ l ++GF++++l  +aa+qa lll +++sdgy++ ee+g+l lgWkd +L+++S
  TRIDC5AG024190.2 474 SPERHVVEQQLLSREIRNVLAVGGPSRTGDVK-FGCWRDSLARSGFGAASLAGSAAAQAALLLGMFPSDGYTLVEENGALKLGWKDLTLLTAS 565
                       **************************999887.************************************************************ PP

              GRAS 372 aWr 374
                       aWr
  TRIDC5AG024190.2 566 AWR 568
                       **8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    
MVRKRPATDM DLPPPRRHVT GDLSDMTAGP PVLSSATAQL PALPSQLLPP FQLQQQQQQQ  60
PVDHMDVAAA PAQAGEAANT TAFVDGIIRD IIGSSGAGVS VAQLIHNLRL RSLLASDPAP  120
PQQHQHQPAL LPNAPMPMVA LPPPPPDKRR REEEREPNNP PQSPKPPSAE EAAAAAAAAA  180
AAASAAVKER KEGQRRKQRD EEGLHLLTLL LQCAESVNAD NLDEAQTALL EIAELATPFG  240
TSTQRVAAYF AEAVSARLVS SCLGLYAPLP HASPAASRLV NGRVAAAFQV FNGISPLVKF  300
SHFTANQAIQ EAFEREERVH IIDLDIMQGL QWPGLFHILA SRPGGPPRVR LTGLGASMDA  360
LEATGKRLSD FADTLGLPFE FCPVADKAGN LDPEKLGVTR REAVAVHWLH HSLYDVTGSD  420
SNTLCLIKRL APKVVTMVEQ DLRHTGSFLA RFVEAIHYYS ALFDSLDASY GEDSPERHVV  480
EQQLLSREIR NVLAVGGPSR TGDVKFGCWR DSLARSGFGA ASLAGSAAAQ AALLLGMFPS  540
DGYTLVEENG ALKLGWKDLT LLTASAWRPI VGASWSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein