PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG024120.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 443aa    MW: 48260.5 Da    PI: 10.9156
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG024120.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH28.62.4e-09139159526
                       --SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                       +C+++ar G+Ck G++C+F Hg
  TRIDC5AG024120.5 139 PCMYYAR-GFCKNGSSCRFVHG 159
                       8******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    
MDAYEATKVV FARVQALHPD LASKIMGMLL IQDKSEEDMI RLAFGPEHLL HAVVARARAD  60
LAAAAHHSKP SSPPTASWGT GLPAEDAPFP GVDQARYEGG GEGFYPPEEF GCWSPASGGQ  120
HRRSFSLSDA EAAAGGWKPC MYYARGFCKN GSSCRFVHGL PDHVTEQDME VWTAAMRSEL  180
MSPAFPFSPS PRGLNFLLQQ QQQQQGDSQR RRRHAQVLRA VASDGPRWRP GLQPRRAADL  240
PDIPGRLHLQ RGGRVLLLQL LRAGAGRAHP VPAEAHVRLR HVRVRGDGAA HPRQGEPAFR  300
LRRARPRQAL QGKGQGPRQV QEVPGPAPWR LRRMHDAHRA ARLQGPLRPP VAADRAEDDV  360
RQHWRPRGVP AEEAGGAAAG GGAAAGHRPA EPPLHGAAAS RPQEGPPPSW LPRSPAVGSP  420
ADRWHRQQQC HSFGGCYHKM SSA