PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG023540.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GRAS | ||||||||
Protein Properties | Length: 715aa MW: 80695.1 Da PI: 6.7947 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 383.7 | 2.2e-117 | 340 | 711 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 l++ L++cA+av+++d + a++lL+++++++ +gd qRla++f+++L+arla+++s+ y+ l +++t+ s+ l+a++l++ ++P+ ++ TRIDC5AG023540.5 340 LRTILIHCAQAVAADDRRTANELLKQIKQHSKVNGDGSQRLAFCFAQGLEARLAGTGSQQYHRLVAKRTT---ASDMLKAYHLYFAACPFKRL 429 5789************************************************************999999...9******************* PP GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184 sh++ Nq+Il ++++++vHiiDf+i GlQWp+L++ L++R++gpp lRiTg++ pe+g +e++eetg+rLa++A++++vpfe++ +a+ TRIDC5AG023540.5 430 SHFLSNQTILSMTKNAKKVHIIDFGIYFGLQWPCLIRRLSKREGGPPILRITGIDVPEPGfrPTERIEETGQRLAEYAKKFEVPFEYHG-IAS 521 ***********************************************************9*****************************.7** PP GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277 ++e+++ e+L+v ++E+++Vn+ ++ +l de+v+++s+r++vL+++++++P ++++ + +++ + F +rf eal ++salfd+lea++pr TRIDC5AG023540.5 522 KWETIRAEDLKVGKDEVVIVNCLYRFRNLIDETVAVDSPRNRVLNTIRQVNPAIFIHGIVNGSYSVPFFITRFREALFHFSALFDMLEATVPR 614 ********************************************************************************************* PP GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370 ++++r+ +Er l+gre+ nv+aceg++r+er et+++W+ r +aGF + pl+++++ +ak ++ ++ + + ++e+sg+l++gWk+r ++++ TRIDC5AG023540.5 615 DDDQRRLIERDLFGREALNVIACEGSDRVERPETYKQWQVRNLRAGFVQSPLNQDIVIKAKDKVKDIYHKDFVIDEDSGWLLQGWKGRIIYAI 707 ********************************************************************888********************** PP GRAS 371 SaWr 374 + W+ TRIDC5AG023540.5 708 TTWK 711 ***8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 715 aa Download sequence |
MIQFCGAPEY FMFNDPQPVI PHHAAAEPSP NAPVATLSRA TNTETDNPED WEFISDESLN 60 YISRMLMEED IDEKVSVYQE ESATLRATAK PFYDILGHKF PPSPDRTLTT WSLDSPSESS 120 SSGHAQSLSS VGTSGSIGGA VHSNQCHNVG HSEQLEAYRG FCGRSSQPLV ASSSGVSDAA 180 ESLEDPLITN GRIPEYLFES LPTWDFRRGV EEAQKFLPGG DKLVIDLEAA GVSKPQEAVK 240 DIPFNVSRTE VLKAKKNRQS EDLDLIEGRN IKQSAFCSDE PDDWVEMFDD LFRQTEKKAT 300 VLREKMRSEA SKNSQVIQTK GTTGVKTRGR KPTKNDVVDL RTILIHCAQA VAADDRRTAN 360 ELLKQIKQHS KVNGDGSQRL AFCFAQGLEA RLAGTGSQQY HRLVAKRTTA SDMLKAYHLY 420 FAACPFKRLS HFLSNQTILS MTKNAKKVHI IDFGIYFGLQ WPCLIRRLSK REGGPPILRI 480 TGIDVPEPGF RPTERIEETG QRLAEYAKKF EVPFEYHGIA SKWETIRAED LKVGKDEVVI 540 VNCLYRFRNL IDETVAVDSP RNRVLNTIRQ VNPAIFIHGI VNGSYSVPFF ITRFREALFH 600 FSALFDMLEA TVPRDDDQRR LIERDLFGRE ALNVIACEGS DRVERPETYK QWQVRNLRAG 660 FVQSPLNQDI VIKAKDKVKD IYHKDFVIDE DSGWLLQGWK GRIIYAITTW KHNNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37650.1 | 0.0 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG023540.5 |