PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG023540.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 737aa    MW: 83187.9 Da    PI: 6.8567
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG023540.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS383.62.3e-1173627331374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ L++cA+av+++d + a++lL+++++++  +gd  qRla++f+++L+arla+++s+ y+ l +++t+    s+ l+a++l++ ++P+ ++
  TRIDC5AG023540.4 362 LRTILIHCAQAVAADDRRTANELLKQIKQHSKVNGDGSQRLAFCFAQGLEARLAGTGSQQYHRLVAKRTT---ASDMLKAYHLYFAACPFKRL 451
                       5789************************************************************999999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       sh++ Nq+Il  ++++++vHiiDf+i  GlQWp+L++ L++R++gpp lRiTg++ pe+g   +e++eetg+rLa++A++++vpfe++  +a+
  TRIDC5AG023540.4 452 SHFLSNQTILSMTKNAKKVHIIDFGIYFGLQWPCLIRRLSKREGGPPILRITGIDVPEPGfrPTERIEETGQRLAEYAKKFEVPFEYHG-IAS 543
                       ***********************************************************9*****************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++e+++ e+L+v ++E+++Vn+ ++  +l de+v+++s+r++vL+++++++P ++++   + +++ + F +rf eal ++salfd+lea++pr
  TRIDC5AG023540.4 544 KWETIRAEDLKVGKDEVVIVNCLYRFRNLIDETVAVDSPRNRVLNTIRQVNPAIFIHGIVNGSYSVPFFITRFREALFHFSALFDMLEATVPR 636
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++++r+ +Er l+gre+ nv+aceg++r+er et+++W+ r  +aGF + pl+++++ +ak  ++ ++ + + ++e+sg+l++gWk+r ++++
  TRIDC5AG023540.4 637 DDDQRRLIERDLFGREALNVIACEGSDRVERPETYKQWQVRNLRAGFVQSPLNQDIVIKAKDKVKDIYHKDFVIDEDSGWLLQGWKGRIIYAI 729
                       ********************************************************************888********************** PP

              GRAS 371 SaWr 374
                       + W+
  TRIDC5AG023540.4 730 TTWK 733
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 737 aa     Download sequence    
VRELQRFSSV EHQTISGSLI HSMIQFCGAP EYFMFNDPQP VIPHHAAAEP SPNAPVATLS  60
RATNTETDNP EDWEFISDES LNYISRMLME EDIDEKVSVY QEESATLRAT AKPFYDILGH  120
KFPPSPDRTL TTWSLDSPSE SSSSGHAQSL SSVGTSGSIG GAVHSNQCHN VGHSEQLEAY  180
RGFCGRSSQP LVASSSGVSD AAESLEDPLI TNGRIPEYLF ESLPTWDFRR GVEEAQKFLP  240
GGDKLVIDLE AAGVSKPQEA VKDIPFNVSR TEVLKAKKNR QSEDLDLIEG RNIKQSAFCS  300
DEPDDWVEMF DDLFRQTEKK ATVLREKMRS EASKNSQVIQ TKGTTGVKTR GRKPTKNDVV  360
DLRTILIHCA QAVAADDRRT ANELLKQIKQ HSKVNGDGSQ RLAFCFAQGL EARLAGTGSQ  420
QYHRLVAKRT TASDMLKAYH LYFAACPFKR LSHFLSNQTI LSMTKNAKKV HIIDFGIYFG  480
LQWPCLIRRL SKREGGPPIL RITGIDVPEP GFRPTERIEE TGQRLAEYAK KFEVPFEYHG  540
IASKWETIRA EDLKVGKDEV VIVNCLYRFR NLIDETVAVD SPRNRVLNTI RQVNPAIFIH  600
GIVNGSYSVP FFITRFREAL FHFSALFDML EATVPRDDDQ RRLIERDLFG REALNVIACE  660
GSDRVERPET YKQWQVRNLR AGFVQSPLNQ DIVIKAKDKV KDIYHKDFVI DEDSGWLLQG  720
WKGRIIYAIT TWKHNNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein