PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG023050.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 608aa MW: 68253.4 Da PI: 7.1059

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG023050.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.5	5.1e-14	62	140	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF +r ks+++++ g +++ +C + gk++ k+ r++C+a +++ +++d+ w+vt+ ++ HnH+++ TRIDC5AG023050.6 62 DFYNLYSWEMGFGIRYGKSRRNTKGG-KCMQEITCVNAGKPNMGGKS----------RRCECTALIRLLRTDDNGWYVTQHRKVHNHAFS 140 6*******************8777.66789******98877..........9***************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
SRRGLEPQLR VRRGRIPDER EPDAQRVSAL EKALTGFAER QTDVVVNPTV GTCFDSITEA 60 YDFYNLYSWE MGFGIRYGKS RRNTKGGKCM QEITCVNAGK PNMGGKSRRC ECTALIRLLR 120 TDDNGWYVTQ HRKVHNHAFS TTYGNKVHWP SHKHLDKYTR DLVRQLRHNN VNLGVYDTIA 180 SFFGRMENVP FNKRSIRTLC GEVIREQAVD DARKTMETAA ASGERPENHT GEETTFNCMG 240 LASTTVGSPN MPVEPLRYPE QDDTHSNAEA GRLADLLLAF GDCHLVLKSC TYDDLINSNG 300 TMSGLEEAVK AVTPHLQQGI FGDLWSRAHN SGGVVSAQVL TIKDLFRFTR WLTTTTGQHN 360 LRCVQQRAKL VNSGKAVLEP EQIALLHLYQ AENDEYSVKM NKLQGERDAK IAHYMAKIDE 420 ARKSFEVSIQ AAKQHYPVSA SYVALDSNEL RAQCWTMYLA QCRKEAKDLN AKASNIVEKY 480 GPEVIQRHLF EFCSQETNRQ ALLKYAQTKV NNLKEAGDAR GEDTLHDYMT LLDIEKAYAL 540 LAAEEQIANC PDTCGGSEDA DRGNINNIIA RGEAADGARG DGQDGGEGAS EGPPRQKRQR 600 NDQDYVWW

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

SRRGLEPQLR VRRGRIPDER EPDAQRVSAL EKALTGFAER QTDVVVNPTV GTCFDSITEA  60
YDFYNLYSWE MGFGIRYGKS RRNTKGGKCM QEITCVNAGK PNMGGKSRRC ECTALIRLLR  120
TDDNGWYVTQ HRKVHNHAFS TTYGNKVHWP SHKHLDKYTR DLVRQLRHNN VNLGVYDTIA  180
SFFGRMENVP FNKRSIRTLC GEVIREQAVD DARKTMETAA ASGERPENHT GEETTFNCMG  240
LASTTVGSPN MPVEPLRYPE QDDTHSNAEA GRLADLLLAF GDCHLVLKSC TYDDLINSNG  300
TMSGLEEAVK AVTPHLQQGI FGDLWSRAHN SGGVVSAQVL TIKDLFRFTR WLTTTTGQHN  360
LRCVQQRAKL VNSGKAVLEP EQIALLHLYQ AENDEYSVKM NKLQGERDAK IAHYMAKIDE  420
ARKSFEVSIQ AAKQHYPVSA SYVALDSNEL RAQCWTMYLA QCRKEAKDLN AKASNIVEKY  480
GPEVIQRHLF EFCSQETNRQ ALLKYAQTKV NNLKEAGDAR GEDTLHDYMT LLDIEKAYAL  540
LAAEEQIANC PDTCGGSEDA DRGNINNIIA RGEAADGARG DGQDGGEGAS EGPPRQKRQR  600
NDQDYVWW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	2e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG023050.6