PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5AG023050.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 601aa MW: 67444.6 Da PI: 6.989

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG023050.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.5	5e-14	55	133	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF +r ks+++++ g +++ +C + gk++ k+ r++C+a +++ +++d+ w+vt+ ++ HnH+++ TRIDC5AG023050.4 55 DFYNLYSWEMGFGIRYGKSRRNTKGG-KCMQEITCVNAGKPNMGGKS----------RRCECTALIRLLRTDDNGWYVTQHRKVHNHAFS 133 6*******************8777.66789******98877..........9***************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MPRVRRGRIP DEREPDAQRV SALEKALTGF AERQTDVVVN PTVGTCFDSI TEAYDFYNLY 60 SWEMGFGIRY GKSRRNTKGG KCMQEITCVN AGKPNMGGKS RRCECTALIR LLRTDDNGWY 120 VTQHRKVHNH AFSTTYGNKV HWPSHKHLDK YTRDLVRQLR HNNVNLGVYD TIASFFGRME 180 NVPFNKRSIR TLCGEVIREQ AVDDARKTME TAAASGERPE NHTGEETTFN CMGLASTTVG 240 SPNMPVEPLR YPEQDDTHSN AEAGRLADLL LAFGDCHLVL KSCTYDDLIN SNGTMSGLEE 300 AVKAVTPHLQ QGIFGDLWSR AHNSGGVVSA QVLTIKDLFR FTRWLTTTTG QHNLRCVQQR 360 AKLVNSGKAV LEPEQIALLH LYQAENDEYS VKMNKLQGER DAKIAHYMAK IDEARKSFEV 420 SIQAAKQHYP VSASYVALDS NELRAQCWTM YLAQCRKEAK DLNAKASNIV EKYGPEVIQR 480 HLFEFCSQET NRQALLKYAQ TKVNNLKEAG DARGEDTLHD YMTLLDIEKA YALLAAEEQI 540 ANCPDTCGGS EDADRGNINN IIARGEAADG ARGDGQDGGE GASEGPPRQK RQRNDQDYVW 600 W

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MPRVRRGRIP DEREPDAQRV SALEKALTGF AERQTDVVVN PTVGTCFDSI TEAYDFYNLY  60
SWEMGFGIRY GKSRRNTKGG KCMQEITCVN AGKPNMGGKS RRCECTALIR LLRTDDNGWY  120
VTQHRKVHNH AFSTTYGNKV HWPSHKHLDK YTRDLVRQLR HNNVNLGVYD TIASFFGRME  180
NVPFNKRSIR TLCGEVIREQ AVDDARKTME TAAASGERPE NHTGEETTFN CMGLASTTVG  240
SPNMPVEPLR YPEQDDTHSN AEAGRLADLL LAFGDCHLVL KSCTYDDLIN SNGTMSGLEE  300
AVKAVTPHLQ QGIFGDLWSR AHNSGGVVSA QVLTIKDLFR FTRWLTTTTG QHNLRCVQQR  360
AKLVNSGKAV LEPEQIALLH LYQAENDEYS VKMNKLQGER DAKIAHYMAK IDEARKSFEV  420
SIQAAKQHYP VSASYVALDS NELRAQCWTM YLAQCRKEAK DLNAKASNIV EKYGPEVIQR  480
HLFEFCSQET NRQALLKYAQ TKVNNLKEAG DARGEDTLHD YMTLLDIEKA YALLAAEEQI  540
ANCPDTCGGS EDADRGNINN IIARGEAADG ARGDGQDGGE GASEGPPRQK RQRNDQDYVW  600
W

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	1e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG023050.4