PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5AG023050.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 506aa MW: 56709.4 Da PI: 6.6903

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG023050.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.7	6.6e-07	4	38	56	90
FAR1 56 aetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++ r++C+a +++ +++d+ w+vt+ ++ HnH+++ TRIDC5AG023050.10 4 KSRRCECTALIRLLRTDDNGWYVTQHRKVHNHAFS 38 5789****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MGGKSRRCEC TALIRLLRTD DNGWYVTQHR KVHNHAFSTT YGNKVHWPSH KHLDKYTRDL 60 VRQLRHNNVN LGVYDTIASF FGRMENVPFN KRSIRTLCGE VIREQAVDDA RKTMETAAAS 120 GERPENHTGE ETTFNCMGLA STTVGSPNMP VEPLRYPEQD DTHSNAEAGR LADLLLAFGD 180 CHLVLKSCTY DDLINSNGTM SGLEEAVKAV TPHLQQGIFG DLWSRAHNSG GVVSAQVLTI 240 KDLFRFTRWL TTTTGQHNLR CVQQRAKLVN SGKAVLEPEQ IALLHLYQAE NDEYSVKMNK 300 LQGERDAKIA HYMAKIDEAR KSFEVSIQAA KQHYPVSASY VALDSNELRA QCWTMYLAQC 360 RKEAKDLNAK ASNIVEKYGP EVIQRHLFEF CSQETNRQAL LKYAQTKVNN LKEAGDARGE 420 DTLHDYMTLL DIEKAYALLA AEEQIANCPD TCGGSEDADR GNINNIIARG EAADGARGDG 480 QDGGEGASEG PPRQKRQRND QDYVWW

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MGGKSRRCEC TALIRLLRTD DNGWYVTQHR KVHNHAFSTT YGNKVHWPSH KHLDKYTRDL  60
VRQLRHNNVN LGVYDTIASF FGRMENVPFN KRSIRTLCGE VIREQAVDDA RKTMETAAAS  120
GERPENHTGE ETTFNCMGLA STTVGSPNMP VEPLRYPEQD DTHSNAEAGR LADLLLAFGD  180
CHLVLKSCTY DDLINSNGTM SGLEEAVKAV TPHLQQGIFG DLWSRAHNSG GVVSAQVLTI  240
KDLFRFTRWL TTTTGQHNLR CVQQRAKLVN SGKAVLEPEQ IALLHLYQAE NDEYSVKMNK  300
LQGERDAKIA HYMAKIDEAR KSFEVSIQAA KQHYPVSASY VALDSNELRA QCWTMYLAQC  360
RKEAKDLNAK ASNIVEKYGP EVIQRHLFEF CSQETNRQAL LKYAQTKVNN LKEAGDARGE  420
DTLHDYMTLL DIEKAYALLA AEEQIANCPD TCGGSEDADR GNINNIIARG EAADGARGDG  480
QDGGEGASEG PPRQKRQRND QDYVWW

Link Out ? help Back to Top
Ensembl	TRIDC5AG023050.10