PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG022090.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 540aa    MW: 59363.1 Da    PI: 6.8241
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG022090.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS347.52.1e-106875281374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                       l++lL++cA  v++g++ +a+ +L+++ +las d+  ++qRlaa+f+ ALa +l++  ++l++al +s++s+ +   + aa++  +++ P+lk
  TRIDC5AG022090.1  87 LISLLYQCASEVAAGEFDRANLCLEHIMQLASLDApHTLQRLAAVFADALACKLLKLLPGLSRALLSSSSSD-DAHLVPAARRHMFDMLPFLK 178
                       5799*******************************99****************************9888874.5555567888999******* PP

              GRAS  93 fshltaNqaIleavegeervHiiDfd..isqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
                       +++lt+N+aI+ea+ege+ vH++D++  + +++QW+aL++++  R++g+p+lRiT+v++    ske l  +   L + Ae++++pf+fn+ v+
  TRIDC5AG022090.1 179 LAYLTTNHAIVEAMEGERFVHVVDLSgpAANPAQWIALFHSFRGRRDGTPNLRITAVHE----SKEFLAGMSAVLVREAEAFDIPFQFNA-VE 266
                       *************************866899****************************....9**************************.79 PP

              GRAS 184 krledleleeL....rvkpgEalaVnlvlqlhrll.......................................................... 214
                        rled+++++L    rv++gEalaV+++lqlhrll                                                          
  TRIDC5AG022090.1 267 ARLEDMDFDALrhnlRVRSGEALAVSVALQLHRLLaaddtggrrqggltplqiiarsspssfgellerelntrlqlspdasafssmspqspig 359
                       99**999987755447888************************************************************************** PP

              GRAS 215 .......desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres....eerikvErellgreivn 296
                              +++ +    + ++L++vk lsPk++vv+eqea+hn++ F erf eal+yy++lfd+le  ++++      er+ vEr +lg+ei++
  TRIDC5AG022090.1 360 ghfpavgQQRPK----IGSFLSAVKALSPKIMVVTEQEANHNGAAFHERFDEALNYYASLFDCLERAAAAQRgsaaAERARVERSVLGEEIRS 448
                       *99855444444....566*********************************************7776555445889**************** PP

              GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee..sgslvlgWkdrpLvsvSaWr 374
                       +vaceg er+erhe++++W  r+e+aG++ v ls++ a++a+ ll++ ++ gy+v ++   ++++l+W+++pL++v+aWr
  TRIDC5AG022090.1 449 IVACEGGERKERHERARQWAGRMEAAGMERVGLSYSGAMEARKLLQRSGWGGYEVRHDaeGHCFFLCWHKKPLYAVTAWR 528
                       *******************************************************9553378999**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 540 aa     Download sequence    
EQCPWLDSPD NLNYSLQGVE PRTWGGIASI MFQQQQPQPQ PQRQQQQEDV MSSATSSPAS  60
TLYSPMPYAF AGTSVQELSS DQCSVRLISL LYQCASEVAA GEFDRANLCL EHIMQLASLD  120
APHTLQRLAA VFADALACKL LKLLPGLSRA LLSSSSSDDA HLVPAARRHM FDMLPFLKLA  180
YLTTNHAIVE AMEGERFVHV VDLSGPAANP AQWIALFHSF RGRRDGTPNL RITAVHESKE  240
FLAGMSAVLV REAEAFDIPF QFNAVEARLE DMDFDALRHN LRVRSGEALA VSVALQLHRL  300
LAADDTGGRR QGGLTPLQII ARSSPSSFGE LLERELNTRL QLSPDASAFS SMSPQSPIGG  360
HFPAVGQQRP KIGSFLSAVK ALSPKIMVVT EQEANHNGAA FHERFDEALN YYASLFDCLE  420
RAAAAQRGSA AAERARVERS VLGEEIRSIV ACEGGERKER HERARQWAGR MEAAGMERVG  480
LSYSGAMEAR KLLQRSGWGG YEVRHDAEGH CFFLCWHKKP LYAVTAWRPA GYHHSGGARS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.11e-102GRAS family protein