PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG021570.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 251aa    MW: 27189.5 Da    PI: 9.936
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG021570.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM127.51.1e-39251652128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                       +pGfrF Pt++el+ +yL+++++g++  ++++vi+ vd+y+++P++L++    +  ++ ++w+fF++r++++ +g r+ r+t sgyWkatg+ 
  TRIDC5AG021570.3  25 TPGFRFYPTEDELLGFYLRHRLAGTTrPHVDRVIPVVDVYSHHPSHLRSmageASVQDAEQWFFFCPRAERELRGGRPARTTPSGYWKATGSP 117
                       69*********************9995666678**************8434532223566********************************* PP

               NAM  90 kevlsk.........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         v+s+         +++++g+k+t+vfy+grap+g kt+W m+ey++
  TRIDC5AG021570.3 118 SCVFSSsssssaaagNSKVIGVKRTMVFYQGRAPTGAKTTWKMNEYKA 165
                       ****998888887777777***************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
LQLIKLAMMT TTSSGGAGGD LLVSTPGFRF YPTEDELLGF YLRHRLAGTT RPHVDRVIPV  60
VDVYSHHPSH LRSMAGEASV QDAEQWFFFC PRAERELRGG RPARTTPSGY WKATGSPSCV  120
FSSSSSSSAA AGNSKVIGVK RTMVFYQGRA PTGAKTTWKM NEYKAVAADD DTTTGHQTTA  180
PLRLRNEFSV CRLYISTGTL RSFDRRPLNT SGNGQAAARR HAPSAANTAS IGQADNYQVF  240
LEHDLPSGAV A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.12e-69NAC family protein