PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG021570.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 178aa    MW: 19336.7 Da    PI: 9.7056
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG021570.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1293.7e-40181582128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                       +pGfrF Pt++el+ +yL+++++g++  ++++vi+ vd+y+++P++L++    +  ++ ++w+fF++r++++ +g r+ r+t sgyWkatg+ 
  TRIDC5AG021570.1  18 TPGFRFYPTEDELLGFYLRHRLAGTTrPHVDRVIPVVDVYSHHPSHLRSmageASVQDAEQWFFFCPRAERELRGGRPARTTPSGYWKATGSP 110
                       69*********************9995666678**************8434532223566********************************* PP

               NAM  90 kevlsk.........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         v+s+         +++++g+k+t+vfy+grap+g kt+W m+ey++
  TRIDC5AG021570.1 111 SCVFSSsssssaaagNSKVIGVKRTMVFYQGRAPTGAKTTWKMNEYKA 158
                       ****998888887777777***************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MMTTTSSGGA GGDLLVSTPG FRFYPTEDEL LGFYLRHRLA GTTRPHVDRV IPVVDVYSHH  60
PSHLRSMAGE ASVQDAEQWF FFCPRAEREL RGGRPARTTP SGYWKATGSP SCVFSSSSSS  120
SAAAGNSKVI GVKRTMVFYQ GRAPTGAKTT WKMNEYKAVA ADDDTTTGHQ TTAPLRMP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.11e-57NAC family protein