PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5AG021150.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 442aa MW: 50182 Da PI: 6.5781

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG021150.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	79.3	5.7e-25	118	214	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyf 82 +Wt+++v++Li+a ++++e+ +++ kk++W+++sk++ erg+++sp+qC++k+++lnkryk+++++ +++ t++++++ +++ TRIDC5AG021150.3 118 KWTDSMVKLLITAASYTGEDPGADLgcgrrncamvHKKGKWKAISKVIGERGCNVSPQQCEDKFNDLNKRYKRLTDILGQGtTCKVVENPALL 210 7*******************8633466677888******************************************77****** PP trihelix 83 dqle 86 d+++ TRIDC5AG021150.3 211 DRMD 214 *8 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MEGNNLPPGN FMQGATYGSS DLHRNPMQMH GPSSGNQGFN HSQIPGKFPM PMNQVTDSDH 60 LSEFQFRGQR KADHHQVHHH HYHKKDSMSD DEEHGLNEDT TDSHSSKGKK GSAWQRMKWT 120 DSMVKLLITA ASYTGEDPGA DLGCGRRNCA MVHKKGKWKA ISKVIGERGC NVSPQQCEDK 180 FNDLNKRYKR LTDILGQGTT CKVVENPALL DRMDNLSDKL KDDARKILSS RHLFYEEMCS 240 YHNNNRISLP EDLPLQRSLQ FALRCKEEND MMRGASGDAD EDDQSSDSDY EEDNDEDHHV 300 AHSNKGGLPM QKKMRYTADH EDAGFGNSLS AHECSQRSNP HGIALDINKV VPDGTSLALT 360 QKGLVLQSAE LEKQCLKIEN EALELAEQRL KWELSSKIKD KELERMRSDN EHMKIEIKRL 420 ELEVRRKELE LELKLKGNVN HS

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MEGNNLPPGN FMQGATYGSS DLHRNPMQMH GPSSGNQGFN HSQIPGKFPM PMNQVTDSDH  60
LSEFQFRGQR KADHHQVHHH HYHKKDSMSD DEEHGLNEDT TDSHSSKGKK GSAWQRMKWT  120
DSMVKLLITA ASYTGEDPGA DLGCGRRNCA MVHKKGKWKA ISKVIGERGC NVSPQQCEDK  180
FNDLNKRYKR LTDILGQGTT CKVVENPALL DRMDNLSDKL KDDARKILSS RHLFYEEMCS  240
YHNNNRISLP EDLPLQRSLQ FALRCKEEND MMRGASGDAD EDDQSSDSDY EEDNDEDHHV  300
AHSNKGGLPM QKKMRYTADH EDAGFGNSLS AHECSQRSNP HGIALDINKV VPDGTSLALT  360
QKGLVLQSAE LEKQCLKIEN EALELAEQRL KWELSSKIKD KELERMRSDN EHMKIEIKRL  420
ELEVRRKELE LELKLKGNVN HS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	2e-97	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG021150.3