PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG020650.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 395aa MW: 40896.7 Da PI: 6.3

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG020650.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	130.8	1.3e-40	97	214	2	112
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..... 88 a +k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai ++tgt++++a+++ + s+ s+ + TRIDC5AG020650.2 97 ALAKRPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAILAATGTGTIPANFSsLNISRAASGT----Srpapf 185 5689*****************************************************************88843334333333....222346 PP TCP 89 .....kaaksaakskksqksaasalnlak 112 + +++s ++q++ +++l +++ TRIDC5AG020650.2 186 palalHPHHPHHQSPHPQHDMSTMLGYHH 214 66555333333344444444444554444 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
SGGGGSGGGG GCGAPSSSNS GGGSAGGTSG SRGGGSDHHP HHPFYYAGPA EPNNVQQQPQ 60 PQQFIGSLAI TPVVTDQAPA SSAEKKAVAP VTPSAGALAK RPSKDRHTKV DGRGRRIRMP 120 ALCAARVFQL TRELGHKSDG ETIEWLLQQA EPAILAATGT GTIPANFSSL NISRAASGTS 180 RPAPFPALAL HPHHPHHQSP HPQHDMSTML GYHHLLPPPQ EPPQDANSPG SFMRKRYRED 240 LFKEDDERQD PNAPKAREQQ AAPPAAMWAV APNSAAPGGA FWMLPVSASQ AAAVRPTEQP 300 MWSFGGGGGS STVQAPLQFM STRVNYPGSA GAMGGMPDTN IGMLAGLNAY DRGGGGEQQE 360 MEQQRDGSGG GNEGEEDGDD DSGGEEEGHR DNSSQ

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

SGGGGSGGGG GCGAPSSSNS GGGSAGGTSG SRGGGSDHHP HHPFYYAGPA EPNNVQQQPQ  60
PQQFIGSLAI TPVVTDQAPA SSAEKKAVAP VTPSAGALAK RPSKDRHTKV DGRGRRIRMP  120
ALCAARVFQL TRELGHKSDG ETIEWLLQQA EPAILAATGT GTIPANFSSL NISRAASGTS  180
RPAPFPALAL HPHHPHHQSP HPQHDMSTML GYHHLLPPPQ EPPQDANSPG SFMRKRYRED  240
LFKEDDERQD PNAPKAREQQ AAPPAAMWAV APNSAAPGGA FWMLPVSASQ AAAVRPTEQP  300
MWSFGGGGGS STVQAPLQFM STRVNYPGSA GAMGGMPDTN IGMLAGLNAY DRGGGGEQQE  360
MEQQRDGSGG GNEGEEDGDD DSGGEEEGHR DNSSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G35560.1	2e-49	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG020650.2