PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG020080.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GATA

Protein Properties

Length: 514aa MW: 55538.2 Da PI: 10.1979

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG020080.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	35.3	1.6e-11	156	190	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C++ +Tp+ R+gp g tLCnaCG+ y k+g+ TRIDC5AG020080.6 156 CLHCKAVETPQRRSGPMGRGTLCNACGVWYSKNGT 190 99******************************997 PP
2	GATA	31.9	1.9e-10	246	280	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+++ plW +g+ g +++C aCG++y+k +l TRIDC5AG020080.6 246 CLHCGSSDPPLWIEGSMGRREVCTACGMRYKKGRL 280 99******************************986 PP
3	GATA	55	1.1e-17	350	384	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+++Tp+WR+gp g tLCnaCG++yr +l TRIDC5AG020080.6 350 CQHCGSSETPQWREGPKGRATLCNACGVRYRQGRL 384 *******************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
VHGDGGGRRG RRGTSIGLSF FTFGGWPPGL GRGRCPRFRR SEATRGMAGG GGVGGKEDGG 60 TEPLLLSVLA LPATALPAVV SRLEAAVPRK ARSYLPRNVP SAWWSLRIPF IQPLPPAGDP 120 ANEEEGRRFP RTQRVQVAPS LDPGTADKPP KRLKRCLHCK AVETPQRRSG PMGRGTLCNA 180 CGVWYSKNGT LPEHRPVASP IVDSPLESPI WEPEVPGAIY LVRKSATERM PPRTEAAPAP 240 RPGTSCLHCG SSDPPLWIEG SMGRREVCTA CGMRYKKGRL LPECRPAECS VTDSQQESPV 300 INSPPESPIW EPEAPPSVHL PRKPSKKKKR RRSRSEAPSA PWPANKGKRC QHCGSSETPQ 360 WREGPKGRAT LCNACGVRYR QGRLLPEYRP VASPTFVPTK HANTHRKVLQ LHRTRQSNDE 420 HPSPLPADSV TNLPPIRNEL PTTSTAGLAS EDPTDAPGYT DNPINVPSSL DSLLLDGPSA 480 PLIILMLGNF KLSITEGHCT GPSSDQTSSV NSTI

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

VHGDGGGRRG RRGTSIGLSF FTFGGWPPGL GRGRCPRFRR SEATRGMAGG GGVGGKEDGG  60
TEPLLLSVLA LPATALPAVV SRLEAAVPRK ARSYLPRNVP SAWWSLRIPF IQPLPPAGDP  120
ANEEEGRRFP RTQRVQVAPS LDPGTADKPP KRLKRCLHCK AVETPQRRSG PMGRGTLCNA  180
CGVWYSKNGT LPEHRPVASP IVDSPLESPI WEPEVPGAIY LVRKSATERM PPRTEAAPAP  240
RPGTSCLHCG SSDPPLWIEG SMGRREVCTA CGMRYKKGRL LPECRPAECS VTDSQQESPV  300
INSPPESPIW EPEAPPSVHL PRKPSKKKKR RRSRSEAPSA PWPANKGKRC QHCGSSETPQ  360
WREGPKGRAT LCNACGVRYR QGRLLPEYRP VASPTFVPTK HANTHRKVLQ LHRTRQSNDE  420
HPSPLPADSV TNLPPIRNEL PTTSTAGLAS EDPTDAPGYT DNPINVPSSL DSLLLDGPSA  480
PLIILMLGNF KLSITEGHCT GPSSDQTSSV NSTI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	326	331	KKKKRR
2	326	332	KKKKRRR
3	327	333	KKKKRRR
4	327	332	KKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32890.1	5e-30	GATA family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG020080.6