PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG016560.12 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C2H2 | ||||||||
Protein Properties | Length: 242aa MW: 26660.5 Da PI: 4.631 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.5 | 0.00022 | 210 | 229 | 3 | 22 |
ETTTTEEESSHHHHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrHirt 22 C+ Cg +F ++s L +H+ TRIDC5AG016560.12 210 CETCGDTFESRSKLFSHLEE 229 *****************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
DFKPANESEE SDWSDAAEEL AEELDEGLEV ADEDNGNKDF NNGEQEVGSY DETSVLEAML 60 SSRKNKKSGY VVPQEEAPSV VTEDDNSEDR NSEVKSVKKK GRRRRASKKG QDEGSYADSG 120 HGMKNDVPYE ESVHDNDEND ADDKAEGPPT SNDDGTSASV GSQQNEKTDN PKKNKKNKKG 180 AEKKTTVSAD LKFTSKGKKQ KEVSKASNDC ETCGDTFESR SKLFSHLEET GHAVIKARQK 240 KR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74250.1 | 2e-08 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG016560.12 |