PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5AG016180.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 366aa MW: 40172.9 Da PI: 8.1506

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG016180.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.7	8.8e-32	98	154	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgs++prsYY+Ct+++Cpvkkkve+++ d+++ ei+Y+g+Hnh+ TRIDC5AG016180.4 98 DDGYNWRKYGQKVVKGSDCPRSYYKCTHPSCPVKKKVEHAE-DGQISEIIYKGKHNHQ 154 8************************************99.*************8 PP
2	WRKY	108.6	2.9e-34	254	312	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+agC+v+k++er+++dpk+v++tYeg+Hnhe TRIDC5AG016180.4 254 LDDGYRWRKYGQKVVKGNPHPRSYYKCTFAGCNVRKHIERASSDPKAVITTYEGKHNHE 312 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MGQDKVPGGF GMSHQQALAQ VTAQASHSPL RMFDHTEQPS FSAAATSSGA LQNMSSAANV 60 AEMSEMATTI SNNEHAAFQS AEASHRYQVP APVDKPADDG YNWRKYGQKV VKGSDCPRSY 120 YKCTHPSCPV KKKVEHAEDG QISEIIYKGK HNHQRPPNKR AKDGSSSAAE QNEQSNDTAS 180 GLSGVRRDQE AVYGMSEQLS GLSDGDDKDD GESRPNEVDD RENDCKRRNI QISSQKALTE 240 SKIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPHPRSYYKC TFAGCNVRKH IERASSDPKA 300 VITTYEGKHN HEPPVGRGSN QNGGNSNRSQ QKGSNSMSSN QASHTRTDLG NVNQGQIGVL 360 QFKREE

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MGQDKVPGGF GMSHQQALAQ VTAQASHSPL RMFDHTEQPS FSAAATSSGA LQNMSSAANV  60
AEMSEMATTI SNNEHAAFQS AEASHRYQVP APVDKPADDG YNWRKYGQKV VKGSDCPRSY  120
YKCTHPSCPV KKKVEHAEDG QISEIIYKGK HNHQRPPNKR AKDGSSSAAE QNEQSNDTAS  180
GLSGVRRDQE AVYGMSEQLS GLSDGDDKDD GESRPNEVDD RENDCKRRNI QISSQKALTE  240
SKIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPHPRSYYKC TFAGCNVRKH IERASSDPKA  300
VITTYEGKHN HEPPVGRGSN QNGGNSNRSQ QKGSNSMSSN QASHTRTDLG NVNQGQIGVL  360
QFKREE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-101	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG016180.4