PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG010290.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 442aa    MW: 50430.5 Da    PI: 8.9643
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG010290.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.57.7e-111583899
                      EEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3 38 ledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      le ++g+++++++   +  ++++l++GW  F++a +Lke D +vF+++g s f  +v +f+ 
  TRIDC5AG010290.4  1 LEAPDGNVYNIRV--INDLNKIFLRSGWAAFASAYELKEHDLLVFRYIGYSHF--KVLIFDP 58
                      57799********..999999****************************9999..9999885 PP
2B360.33.3e-193474331299
                       HTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3  12 ksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                        +++l++p+kfa++h     +++  l l+  +g++W v++ y  +  r +  + W +Fv++n+L+eg ++vF+l++  +++++ v+vfrk
  TRIDC5AG010290.4 347 GNNLLTIPRKFAAKHlA-A-RSHDILLLRPNRGKKWCVRYYYHSS-LRGFSNSPWTKFVRDNKLQEGHVCVFELIKGvRKATMIVHVFRK 433
                       45889**********42.3.344456667799********55555.5556899**********************888**********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    
LEAPDGNVYN IRVINDLNKI FLRSGWAAFA SAYELKEHDL LVFRYIGYSH FKVLIFDPSG  60
CEKELFHIVM NHTPNLPETG ISHDQPFLKE TRRHCESRDY NSRKTKKMTP LDSPSPRSAE  120
GVKSPEDTLN SGGLRETTKP RYVLATGCNL TTAQKAEVDA LVRKVRPVIP FYITAMSKTS  180
ISGSLVICKD YADKYLPDGD QFITLCHPHK SNIWIDNLKV ITDGSRMLSV GWSCFVLHNE  240
LRESDICLFE VWKSDGDVTM VVHSLEGGHH LQGKEPESQK KRRYPVKAEA TEDEESDKEH  300
AESNYYYSRH ANGLTSDEQE DIFRSALIQQ GNPVYVAVLG KNHVKKGNNL LTIPRKFAAK  360
HLAARSHDIL LLRPNRGKKW CVRYYYHSSL RGFSNSPWTK FVRDNKLQEG HVCVFELIKG  420
VRKATMIVHV FRKVDGRLVL LD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-12B3 family protein