PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG010160.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | B3 | ||||||||
Protein Properties | Length: 398aa MW: 45241.3 Da PI: 6.5741 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 37.7 | 3.7e-12 | 1 | 59 | 37 | 99 |
EEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 37 tledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +le ++g++ +v++ +k ++ v+++GW Fv+ +L++gD+++F+++g+s+f v++f++ TRIDC5AG010160.1 1 MLEVPNGEKHSVQV--SKEENGLVFQSGWAAFVSTYELEQGDSLLFEFSGSSCF--EVRIFNQ 59 578899********..**********************************9***..8888875 PP | |||||||
2 | B3 | 54.5 | 2.2e-17 | 82 | 172 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 ff v++ + +k+g l++pk fa+++ ++ s ++ le ++g+ + +++ + + vl++GW +F +a +L+egD+v+F ++g+s f + TRIDC5AG010160.1 82 FFMVMMGVSDSKNG-LTIPKGFANNIRQQ--ISEKIELELPDGQNFGIQV--AEERHELVLRSGWDRFSSAYDLEEGDIVLFGYSGNSHF--K 167 66677777777777.********877655..7789***************..999999****************************9999..9 PP EEEE- CS B3 94 vkvfr 98 v++f+ TRIDC5AG010160.1 168 VRIFD 172 99987 PP | |||||||
3 | B3 | 58.3 | 1.4e-18 | 240 | 330 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 ffkv+ +++k + +p kfa+++ g s +l+le ++g+ ++v++ + + + vl++GW +F++ +Lk +Df+vF+++g+s f + TRIDC5AG010160.1 240 FFKVM-ILSNFKD-EMAIPPKFATNFRGH--ISDELKLEVPDGKIYNVQV--AREQHELVLGSGWANFARTYELKRNDFLVFTYSGDSHF--K 324 78888.3444544.59*******888666..6779***************..99999*****************************9999..9 PP EEEE-S CS B3 94 vkvfrk 99 vk+f+ TRIDC5AG010160.1 325 VKIFKP 330 999975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 398 aa Download sequence |
MLEVPNGEKH SVQVSKEENG LVFQSGWAAF VSTYELEQGD SLLFEFSGSS CFEVRIFNQT 60 GCEKELSCVA MNRTPCVHKM RFFMVMMGVS DSKNGLTIPK GFANNIRQQI SEKIELELPD 120 GQNFGIQVAE ERHELVLRSG WDRFSSAYDL EEGDIVLFGY SGNSHFKVRI FDISGCDKLL 180 SCVMKNFTTC AQQKSGCHDN PMQSPRERTG PNDRRNRACT ICIECVARHY WHMEDHTWSF 240 FKVMILSNFK DEMAIPPKFA TNFRGHISDE LKLEVPDGKI YNVQVAREQH ELVLGSGWAN 300 FARTYELKRN DFLVFTYSGD SHFKVKIFKP SGCENELSCV TMSCVLALVP TDIFQDQSLP 360 TKKEGRYDGT SDSWRTSKIN QADSSSQKSS SVLNRLKM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18960.1 | 1e-13 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG010160.1 |