PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG010140.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 734aa    MW: 84820.4 Da    PI: 5.6583
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG010140.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.18.3e-20200282191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fYn+YA  +GF+ ++ +++ +      +k ++ C+++gk++ + +  +++r++++ ++t+C+ak+ vk+  +g+we t++++eHnH+l+p
  TRIDC5AG010140.5 200 RFYNTYALLTGFEAKRGTNYMR------KKFHLICNRSGKSRATPDL-QRKRKRKSIEKTNCQAKVIVKLA-KGQWEFTTVRNEHNHPLCP 282
                       5*****************9998......4678**********99988.99999******************.9****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 734 aa     Download sequence    
MPPSPGADTQ KFVMGDMVTE LDEAQVRNAE NSTEQRKAYN VVDHEVSPAT ELPSGKEPVG  60
NQSMTEGRLQ PAGDNYQEPV GKQSMTEGTL QPAGDNDQDP SSDSIEKNTE GLLADGQDQQ  120
TNSVYHPLQQ AEEENQLHDI VESNEMLRNN SSSETDSDSS SGSDSDSEVG KYFYPQIEQL  180
EMAKQPEPGM KFQTLEDAHR FYNTYALLTG FEAKRGTNYM RKKFHLICNR SGKSRATPDL  240
QRKRKRKSIE KTNCQAKVIV KLAKGQWEFT TVRNEHNHPL CPSASLTKFY LSHKHISTEE  300
RSFLKVLQRT RIPPNKVMKI FRRMRGSFGS IPFKKKDGTN LLCIEQHRKE NSDVGRMLMY  360
FKEKELQDPS FQCMKQTDED NIVRSVFWTD ARSRMDYEIF GDFLLFDTTY TTDRHNMLFA  420
PIIGINNHGR TLLLGCALLH DESAETYKWM FETLLHVMED KMPVSIITNQ DEAMAKAIGE  480
VMPQVRHRLC KWDVLEKAQQ NISAFIAESG NIKADLNSLI DNSLTEKEFE EGWDALIERY  540
GASENEYLQL LWQRRKNWVP VYFREDFYPF VQSHGCDEGM NLLFNDYVLS IDRIEKFIER  600
YEEIHKNITK TDEEDRLQTG TVPSCFSLQP IEKHAADIYT RQIFLKVQRE LLHSTAFNVQ  660
EVQRGAVYRL NKVFNYENPE FDRNNFEVQV ESGTNAFKCQ CAKFTRDGIL CCHIFRLFTQ  720
FGINQIPEQY IVPR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1242247RKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-79FAR1 family protein