PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG010140.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 619aa    MW: 72504.1 Da    PI: 6.8196
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG010140.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.46.5e-2085167191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fYn+YA  +GF+ ++ +++ +      +k ++ C+++gk++ + +  +++r++++ ++t+C+ak+ vk+  +g+we t++++eHnH+l+p
  TRIDC5AG010140.1  85 RFYNTYALLTGFEAKRGTNYMR------KKFHLICNRSGKSRATPDL-QRKRKRKSIEKTNCQAKVIVKLA-KGQWEFTTVRNEHNHPLCP 167
                       5*****************9998......4678**********99988.99999******************.9****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 619 aa     Download sequence    
GQDQQTNSVY HPLQQAEEEN QLHDIVESNE MLRNNSSSET DSDSSSGSDS DSEVGKYFYP  60
QIEQLEMAKQ PEPGMKFQTL EDAHRFYNTY ALLTGFEAKR GTNYMRKKFH LICNRSGKSR  120
ATPDLQRKRK RKSIEKTNCQ AKVIVKLAKG QWEFTTVRNE HNHPLCPSAS LTKFYLSHKH  180
ISTEERSFLK VLQRTRIPPN KVMKIFRRMR GSFGSIPFKK KDGTNLLCIE QHRKENSDVG  240
RMLMYFKEKE LQDPSFQCMK QTDEDNIVRS VFWTDARSRM DYEIFGDFLL FDTTYTTDRH  300
NMLFAPIIGI NNHGRTLLLG CALLHDESAE TYKWMFETLL HVMEDKMPVS IITNQDEAMA  360
KAIGEVMPQV RHRLCKWDVL EKAQQNISAF IAESGNIKAD LNSLIDNSLT EKEFEEGWDA  420
LIERYGASEN EYLQLLWQRR KNWVPVYFRE DFYPFVQSHG CDEGMNLLFN DYVLSIDRIE  480
KFIERYEEIH KNITKTDEED RLQTGTVPSC FSLQPIEKHA ADIYTRQIFL KVQRELLHST  540
AFNVQEVQRG AVYRLNKVFN YENPEFDRNN FEVQVESGTN AFKCQCAKFT RDGILCCHIF  600
RLFTQFGINQ IPEQYIVPR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127132RKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-80FAR1 family protein