PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG010000.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 349aa MW: 37425 Da PI: 7.2139

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG010000.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.6	2.2e-31	98	151	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH++Fv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ TRIDC5AG010000.1 98 PRMRWTTALHAHFVRAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 151 9****************************************************7 PP
2	Myb_DNA-binding	47.3	4.9e-15	99	150	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ +v+av++lGg+ t+k++ + m+ k +tl ++ks++q+y+ TRIDC5AG010000.1 99 RMRWTTALHAHFVRAVELLGGHeraTPKSVLELMNvKDLTLAHVKSHLQMYR 150 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MSSPPPPPLP EACSITTAIA PDLSLHISPP LPDAVVGDDG EVRLGLHEVA SKRYRGLEEM 60 LHQPNKAHGF KKSSCPAVGG SAVARPAAGG RKRSSRAPRM RWTTALHAHF VRAVELLGGH 120 ERATPKSVLE LMNVKDLTLA HVKSHLQMYR TVKGTERSCA AGHGQTRDMG FLRRVVAGDE 180 LVNGFDGFNS NMVNTTSNNT TPRRSESPAG EQGHHDAWGT QAAAAAGAAT TTMVPPYLTT 240 SEPHDNEHMM PESGMARPAA PRRGRPSPNN TSSSGSDDVD ETESFGWLAL TRRRYDDGGD 300 GDCAGDRELQ GAAMVMDPSL EMRLGRQGWE QMEPSASASK ELTPILKCL

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MSSPPPPPLP EACSITTAIA PDLSLHISPP LPDAVVGDDG EVRLGLHEVA SKRYRGLEEM  60
LHQPNKAHGF KKSSCPAVGG SAVARPAAGG RKRSSRAPRM RWTTALHAHF VRAVELLGGH  120
ERATPKSVLE LMNVKDLTLA HVKSHLQMYR TVKGTERSCA AGHGQTRDMG FLRRVVAGDE  180
LVNGFDGFNS NMVNTTSNNT TPRRSESPAG EQGHHDAWGT QAAAAAGAAT TTMVPPYLTT  240
SEPHDNEHMM PESGMARPAA PRRGRPSPNN TSSSGSDDVD ETESFGWLAL TRRRYDDGGD  300
GDCAGDRELQ GAAMVMDPSL EMRLGRQGWE QMEPSASASK ELTPILKCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.2	2e-36	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG010000.1