PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG008250.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family CPP
Protein Properties Length: 309aa    MW: 34665 Da    PI: 6.5957
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG008250.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR22.62.1e-076291740
               TCR 17 YCeCfaagkkCseeCkCedCkNke 40
                      YC Cfa+g++Cse C C+ C Nk+
  TRIDC5AG008250.6  6 YCVCFASGSQCSELCGCDPCYNKT 29
                      **********************97 PP
2TCR45.61.4e-1468103439
               TCR   4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                       ++C+Ckks ClkkYC+C++ g+ Cs +CkC+dCkN 
  TRIDC5AG008250.6  68 RKCTCKKSGCLKKYCDCYQGGAGCSINCKCDDCKNP 103
                       79*********************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
KLVDCYCVCF ASGSQCSELC GCDPCYNKTI HGVQQNTPPG LPLQVVRPAE GGQNSAEFAR  60
YQIDFFRRKC TCKKSGCLKK YCDCYQGGAG CSINCKCDDC KNPYGKKVGV ILDGKSILAA  120
PTPTPNERNG AEVISSDDDD DDEDDYYMNR PLSPIPPSPV SRESSFQQET LVGVEVHTVN  180
GHLYPKPLTQ VRPESWQLSR RPAEEARGDQ WRYMRRPSED GTSDAMEGHA DPKFHHQRDS  240
NNKQRESHAD NRFSIPRCIE VMNGMADLSP VDKSLAPDVF LDPSNREIFL SLSVDIRTMW  300
LKRKMRSLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14770.12e-26CPP family protein