PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5AG008250.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 370aa MW: 41655.2 Da PI: 8.1739

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG008250.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.6	2.8e-14	53	90	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +++C+Ckks+Clk+YC Cfa+g++Cse C C+ C Nk+ TRIDC5AG008250.3 53 CRTCSCKKSRCLKLYCVCFASGSQCSELCGCDPCYNKT 90 789*********************************97 PP
2	TCR	45.3	1.7e-14	129	164	4	39
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++C+Ckks ClkkYC+C++ g+ Cs +CkC+dCkN TRIDC5AG008250.3 129 RKCTCKKSGCLKKYCDCYQGGAGCSINCKCDDCKNP 164 79*********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
HFLPFSAKSG FRLRFPLLVR CVRSIFSGIP SHQPFIFSPV FGYRRKAEDG EGCRTCSCKK 60 SRCLKLYCVC FASGSQCSEL CGCDPCYNKT IHGVQQNTPP GLPLQVVRPA EGGQNSAEFA 120 RYQIDFFRRK CTCKKSGCLK KYCDCYQGGA GCSINCKCDD CKNPYGKKVG VILDGKSILA 180 APTPTPNERN GAEVISSDDD DDDEDDYYMN RPLSPIPPSP VSRESSFQQE TLVGVEVHTV 240 NGHLYPKPLT QVRPESWQLS RRPAEEARGD QWRYMRRPSE DGTSDAMEGH ADPKFHHQRD 300 SNNKQRESHA DNRFSIPRCI EVMNGMADLS PVDKSLAPDV FLDPSNREIF LSLSVDIRTM 360 WLKRKMRSLV

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

HFLPFSAKSG FRLRFPLLVR CVRSIFSGIP SHQPFIFSPV FGYRRKAEDG EGCRTCSCKK  60
SRCLKLYCVC FASGSQCSEL CGCDPCYNKT IHGVQQNTPP GLPLQVVRPA EGGQNSAEFA  120
RYQIDFFRRK CTCKKSGCLK KYCDCYQGGA GCSINCKCDD CKNPYGKKVG VILDGKSILA  180
APTPTPNERN GAEVISSDDD DDDEDDYYMN RPLSPIPPSP VSRESSFQQE TLVGVEVHTV  240
NGHLYPKPLT QVRPESWQLS RRPAEEARGD QWRYMRRPSE DGTSDAMEGH ADPKFHHQRD  300
SNNKQRESHA DNRFSIPRCI EVMNGMADLS PVDKSLAPDV FLDPSNREIF LSLSVDIRTM  360
WLKRKMRSLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	3e-35	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG008250.3