PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5AG006670.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 132aa MW: 14757.9 Da PI: 11.0024

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG006670.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.7	1.7e-17	80	132	4	52
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrR 52 ++t+eq+e+Le++++++++ps +r+++ + + +++ +q+kvWFqNrR TRIDC5AG006670.2 80 YVRYTPEQVEALERVYNECPKPSSLRRQQIIRDCpilcNIEPKQIKVWFQNRR 132 6789************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 132 aa Download sequence
KKPESERHGD PPQRSTPRSL LSLPQAMTRH RPWPPSHPPP PPHPHPLRAA AAAATGSGGG 60 KKMARLSPGA AAPQVDTGKY VRYTPEQVEA LERVYNECPK PSSLRRQQII RDCPILCNIE 120 PKQIKVWFQN RR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30490.1	2e-33	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG006670.2