PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG006660.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NF-YA | ||||||||
Protein Properties | Length: 210aa MW: 22770.1 Da PI: 9.1919 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 104.3 | 1.1e-32 | 106 | 162 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak+e+e+kl +k+rkpylheSRh+hAl+R+Rg gGrF TRIDC5AG006660.4 106 EEPVYVNAKQYNAILRRRQSRAKAESERKL-IKGRKPYLHESRHQHALKRARGAGGRF 162 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
HFYATISRAG DHRADEQQKQ AAAQGNQEEA PATSIGSQAM VATPSTDYVT PYGHQEACHA 60 MGQIAYPTVD PFYGSLYAAY GGQPMMHPPM VGMHAAAIPL PTDAIEEPVY VNAKQYNAIL 120 RRRQSRAKAE SERKLIKGRK PYLHESRHQH ALKRARGAGG RFLNAKSDDN EEHSDSSSKD 180 KQNGVAPRSS GQSSQSPKGA TSADKSGNHE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 2e-39 | NF-YA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG006660.4 |