PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG006300.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 310aa    MW: 33735.3 Da    PI: 9.6242
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG006300.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.21.2e-10555146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                      +++WT+eE+  l+ ++ ++G g W+tI +          R+  ++k++w++
  TRIDC5AG006300.4  5 KQKWTAEEEAALKAGIGKHGAGKWRTILKDPEfsnilRYRSNVDLKDKWRN 55
                      79***********************************99***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MGAPKQKWTA EEEAALKAGI GKHGAGKWRT ILKDPEFSNI LRYRSNVDLK DKWRNMNVTV  60
NASGTRDKVR TTTTTTPTAK KPRSAPKQEN HPTAITTITS DGDDDVVDVK PIIKPIVTFT  120
TGSGNKSLSR LENIILEAVK TLNEPTGSYK TAVANYIEEQ YWPPADFDHV LSAKLNELTS  180
SGKLMKVNRK YRIAPSSSFL EGRSSKMLLL DDIKKEPTKV EKVERDGFTA HTKSQVDAEL  240
ARMRNMSAEE AAAAAARAVA EADAIMAEAE AAMREAEAAE ADAVAAQAFA EAAMLTLKNR  300
SSAKLVIVSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-60MYB_related family protein