PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG004710.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | TCP | ||||||||
Protein Properties | Length: 249aa MW: 27141.1 Da PI: 6.6767 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 82.6 | 9.6e-26 | 2 | 124 | 16 | 89 |
TCP 16 ggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........................ssssaseceaesssssas 83 g+RdRR+Rls+++a++f+d+qd+LG+d++sk+ieWL+q+a +ai+ l+++ + TRIDC5AG004710.3 2 GLRDRRIRLSVQTAIQFYDIQDRLGVDQPSKAIEWLIQAAATAIDGLPSLdcsfalpvaspaaedavevstsetsK----------------- 77 89************************************************99888877444444444333322220................. PP TCP 84 nsssg.............................................k 89 g + TRIDC5AG004710.3 78 ----GsvlslangpadndnaahqanaynggsangtfaellhcsnaadkpmQ 124 ....22222222233223333333334444455555555443322222220 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
RGLRDRRIRL SVQTAIQFYD IQDRLGVDQP SKAIEWLIQA AATAIDGLPS LDCSFALPVA 60 SPAAEDAVEV STSETSKGSV LSLANGPADN DNAAHQANAY NGGSANGTFA ELLHCSNAAD 120 KPMQHQQQQP TLAYYAAPGS HIAPMSFEMI PQLTFSQDQQ HRHHHHHHHH HASVVFDRST 180 LQSNTVSTPQ WPPSQHPFLM QRFSAAPAEP SPMFPFFLGG NSAAAAAPAA ANAPERRLQL 240 WDFKEERKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30210.2 | 5e-22 | TCP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG004710.3 |