PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG004270.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 341aa    MW: 36997.6 Da    PI: 9.0015
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG004270.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA99.72.9e-31176232158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       d+p+YVNaKQy++Il+RR +Rak+e+e++l  k+rkpylheSRh hA+rR+RgsgGrF
  TRIDC5AG004270.1 176 DAPIYVNAKQYEGILRRRRARAKAEKENRL-VKARKPYLHESRHLHAMRRARGSGGRF 232
                       68****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MMSFKNHHEG FAGQQLLAAA AAAGQASGGA PLPWWVGSQL LYGEPMGHGK APPAVPMSMS  60
PPEDACRDGQ FQVVPRAQAL LDAVPLPPQP MGERGIPEAL KFSMAHGKGG NSSEHSAPIT  120
LQSPFTEYND HFELGLGQSV ISSNYYSDQQ YGLLSSYGMR SASSGRMLIP LNMPADAPIY  180
VNAKQYEGIL RRRRARAKAE KENRLVKARK PYLHESRHLH AMRRARGSGG RFLNTKKETN  240
GKDTGVGSKA MVGNRLMRSA ASLSSEIQHS EQGNPSSVSS MSGSEVTSLY DHEDVDHYHN  300
FEHLRTHFFT PLPSIMDGEH GAGNPFKWAA ASDGCCNLLK A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05690.11e-27NF-YA family protein