PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5AG004160.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 735aa MW: 85317.5 Da PI: 7.1663

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG004160.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.5	1.3e-19	116	197	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY++YA +GF ++++++++ +k++ C+++gk+++ ++ +++r+ ++ +rt+C+ak+ vk++ +g+we +++++eHnH+l+p TRIDC5AG004160.5 116 FYSTYALLTGFVAKRNSNYRR------KKYHIECNRSGKPTPARNP-NRKRKINSFERTNCQAKVIVKLT-KGQWEFATVRNEHNHPLSP 197 9**************9999......5789*******9998.9******************.9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 735 aa Download sequence
MTEERPQPTG DSYEELSSDS IEKNTDGILA DEADKETNSV DHSLQQAKEQ NQLHDNVENN 60 EMVNRNPSES DSDSSSGSDS DSELGKYFYP KFEELEAARK PEPGMKFQTL EDANGFYSTY 120 ALLTGFVAKR NSNYRRKKYH IECNRSGKPT PARNPNRKRK INSFERTNCQ AKVIVKLTKG 180 QWEFATVRNE HNHPLSPNPS LARFFLSQKH MSSEEKSFLK VLQQSKIPPN KILRIFRRMR 240 SSFGNKKDPI SLQCTEQRKT ENSDVESALK HFKELELRNP SFFYIKQTDE DNIVRSIFWT 300 DARSRMDYDI FGDFISVDTT YTTNRHNLPV ATIIGINNHG RTLLLGCALL RDGKAETFKW 360 MFQTLLQVMG GKISESIITN QDEPLGRAIA EVLPQVRLRF WKCDVMGKAH ERIAAFMAAR 420 GNIKLELDSL VDNSLTEMEF EEGWSSLIER YDASKNEYLQ FMWRIRKIWA PVYFRQDFYP 480 FAESLGRSEG MNIVLFRNYV LPKDRIEKFI ERYEEIQKTT LKTDDEDRRQ AGTVPSCFSL 540 QPIEKHASTI YTRQIFLKVQ RELLHSTAFD VHVVKKGSVY RLERVFNYEN PEFDRNAFEV 600 FVDPVSNTFI CQCAKFARDR LLCCHIFRLF TQLGINEIPA QYIVPRWTDK FKEEKAKQYT 660 EKCLEKADST ARYEMLMSKM ADLSKKICSD GTKCNTFMLE FDSIQEKLLA TEGENPHSGE 720 LDSQCVGGRV YEFIC

Sequence ? help Back to Top

Protein Sequence Length: 735 aa Download sequence

MTEERPQPTG DSYEELSSDS IEKNTDGILA DEADKETNSV DHSLQQAKEQ NQLHDNVENN  60
EMVNRNPSES DSDSSSGSDS DSELGKYFYP KFEELEAARK PEPGMKFQTL EDANGFYSTY  120
ALLTGFVAKR NSNYRRKKYH IECNRSGKPT PARNPNRKRK INSFERTNCQ AKVIVKLTKG  180
QWEFATVRNE HNHPLSPNPS LARFFLSQKH MSSEEKSFLK VLQQSKIPPN KILRIFRRMR  240
SSFGNKKDPI SLQCTEQRKT ENSDVESALK HFKELELRNP SFFYIKQTDE DNIVRSIFWT  300
DARSRMDYDI FGDFISVDTT YTTNRHNLPV ATIIGINNHG RTLLLGCALL RDGKAETFKW  360
MFQTLLQVMG GKISESIITN QDEPLGRAIA EVLPQVRLRF WKCDVMGKAH ERIAAFMAAR  420
GNIKLELDSL VDNSLTEMEF EEGWSSLIER YDASKNEYLQ FMWRIRKIWA PVYFRQDFYP  480
FAESLGRSEG MNIVLFRNYV LPKDRIEKFI ERYEEIQKTT LKTDDEDRRQ AGTVPSCFSL  540
QPIEKHASTI YTRQIFLKVQ RELLHSTAFD VHVVKKGSVY RLERVFNYEN PEFDRNAFEV  600
FVDPVSNTFI CQCAKFARDR LLCCHIFRLF TQLGINEIPA QYIVPRWTDK FKEEKAKQYT  660
EKCLEKADST ARYEMLMSKM ADLSKKICSD GTKCNTFMLE FDSIQEKLLA TEGENPHSGE  720
LDSQCVGGRV YEFIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	3e-73	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG004160.5