PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5AG004160.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 751aa MW: 86936.3 Da PI: 7.6709

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG004160.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.4	1.3e-19	142	223	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY++YA +GF ++++++++ +k++ C+++gk+++ ++ +++r+ ++ +rt+C+ak+ vk++ +g+we +++++eHnH+l+p TRIDC5AG004160.4 142 FYSTYALLTGFVAKRNSNYRR------KKYHIECNRSGKPTPARNP-NRKRKINSFERTNCQAKVIVKLT-KGQWEFATVRNEHNHPLSP 223 9**************9999......5789*******9998.9******************.9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 751 aa Download sequence
LQASKNAAET MSSASELSKE PVGKQSMTEE RPQPTGDSYE ELSSDSIEKN TDGILADEAD 60 KETNSVDHSL QQAKEQNQLH DNVENNEMVN RNPSESDSDS SSGSDSDSEL GKYFYPKFEE 120 LEAARKPEPG MKFQTLEDAN GFYSTYALLT GFVAKRNSNY RRKKYHIECN RSGKPTPARN 180 PNRKRKINSF ERTNCQAKVI VKLTKGQWEF ATVRNEHNHP LSPNPSLARF FLSQKHMSSE 240 EKSFLKVLQQ SKIPPNKILR IFRRMRSSFG NIPSKKKDPI SLQCTEQRKT ENSDVESALK 300 HFKELELRNP SFFYIKQTDE DNIVRSIFWT DARSRMDYDI FGDFISVDTT YTTNRHNLPV 360 ATIIGINNHG RTLLLGCALL RDGKAETFKW MFQTLLQVMG GKISESIITN QDEPLGRAIA 420 EVLPQVRLRF WKCDVMGKAH ERIAAFMAAR GNIKLELDSL VDNSLTEMEF EEGWSSLIER 480 YDASKNEYLQ FMWRIRKIWA PVYFRQDFYP FAESLGRSEG MNIVLFRNYV LPKDRIEKFI 540 ERYEEIQKTT LKTDDEDRRQ AGTVPSCFSL QPIEKHASTI YTRQIFLKVQ RELLHSTAFD 600 VHVVKKGSVY RLERVFNYEN PEFDRNAFEV FVDPVSNTFI CQCAKFARDR LLCCHIFRLF 660 TQLGINEIPA QYIVPRWTDK FKEEKAKQYT EKCLEKADST ARYEMLMSKM ADLSKKICSD 720 GTKCNTFMLE FDSIQEKLLA TEGENPRNND N

Sequence ? help Back to Top

Protein Sequence Length: 751 aa Download sequence

LQASKNAAET MSSASELSKE PVGKQSMTEE RPQPTGDSYE ELSSDSIEKN TDGILADEAD  60
KETNSVDHSL QQAKEQNQLH DNVENNEMVN RNPSESDSDS SSGSDSDSEL GKYFYPKFEE  120
LEAARKPEPG MKFQTLEDAN GFYSTYALLT GFVAKRNSNY RRKKYHIECN RSGKPTPARN  180
PNRKRKINSF ERTNCQAKVI VKLTKGQWEF ATVRNEHNHP LSPNPSLARF FLSQKHMSSE  240
EKSFLKVLQQ SKIPPNKILR IFRRMRSSFG NIPSKKKDPI SLQCTEQRKT ENSDVESALK  300
HFKELELRNP SFFYIKQTDE DNIVRSIFWT DARSRMDYDI FGDFISVDTT YTTNRHNLPV  360
ATIIGINNHG RTLLLGCALL RDGKAETFKW MFQTLLQVMG GKISESIITN QDEPLGRAIA  420
EVLPQVRLRF WKCDVMGKAH ERIAAFMAAR GNIKLELDSL VDNSLTEMEF EEGWSSLIER  480
YDASKNEYLQ FMWRIRKIWA PVYFRQDFYP FAESLGRSEG MNIVLFRNYV LPKDRIEKFI  540
ERYEEIQKTT LKTDDEDRRQ AGTVPSCFSL QPIEKHASTI YTRQIFLKVQ RELLHSTAFD  600
VHVVKKGSVY RLERVFNYEN PEFDRNAFEV FVDPVSNTFI CQCAKFARDR LLCCHIFRLF  660
TQLGINEIPA QYIVPRWTDK FKEEKAKQYT EKCLEKADST ARYEMLMSKM ADLSKKICSD  720
GTKCNTFMLE FDSIQEKLLA TEGENPRNND N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	7e-75	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG004160.4