PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG003020.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GATA | ||||||||
Protein Properties | Length: 194aa MW: 22283.2 Da PI: 9.3049 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 55.4 | 8.6e-18 | 116 | 150 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++C + +Tp+WR+gp g+ktLCnaCG++y++ +l TRIDC5AG003020.2 116 CTHCLSHTTPQWRSGPLGPKTLCNACGVRYKSGRL 150 *******************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MRCSICLSNS NQTPQQWQGG PSGALLCNTC SLRLKAGNGF IKLERCGQQV DEEQDHGRGQ 60 DKRKIKKTTY YGDDEEPPQE KRRIKKTSFV DEQGKRRTKK TYVNEEVPLE EPVKRCTHCL 120 SHTTPQWRSG PLGPKTLCNA CGVRYKSGRL LPEYRPANSP TFVSFMHSNS HKKVMQMRKS 180 VENEHEHEYS HSDM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60530.1 | 8e-37 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG003020.2 |