PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG002310.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 184aa    MW: 20318 Da    PI: 5.3831
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG002310.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.52.4e-081341755
                      HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      N++f eL +++P++     kK++Ka+iL  Av+Y+++Lq
  TRIDC5AG002310.1  1 NQRFIELSTVIPNL-----KKMDKATILGDAVKYVRELQ 34
                      99************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
NQRFIELSTV IPNLKKMDKA TILGDAVKYV RELQDKVKTM EDDDSAAATT TTTIRSAVLV  60
SKKIKAAADD EEDEDAGESS HGGLPEIEVR VSDEKTVLVR IHCKNARGLL VRVLAVVEDL  120
RLAITHTSVM PFPADTAIIT ITAKVEEGFN STVEEIVRRL NLSLRQHYGA NNSDDRNSVT  180
KREC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-22bHLH family protein