PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG000810.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 740aa MW: 81991.9 Da PI: 10.0335

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG000810.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.4	6.9e-08	45	80	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+++E e+++ a +++G++ W+++a + Rt ++ TRIDC5AG000810.11 45 QWSKDELERFYAAYRKYGKD-WRKVAGAVH-DRTSDMV 80 6***************99.****999.9997665 PP

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence
MSSTRKVRNV NKRYAKINED WPEKDATVVH KNKVRKKKLS DLGSQWSKDE LERFYAAYRK 60 YGKDWRKVAG AVHDRTSDMV EALYNMNRAY LSLPEGTATA AGLIAMMTDH YNILDGSNSD 120 HESNGSPKTS RKPQKRGRAK LQSVSKASDT RYPDLLQSQP ASSSYGCLSL LKKKRSGGNK 180 PRAVGKRTPR VPVASMYRDD KIGPSNRQAK PDANNGDEEG ALAALALAEV CQRGSPQVSQ 240 TSGRSSGQMF LSPGKSIDRK NADSEMGSSK MHGFQVDADY PEGSLGSREA ETGDYPKDAS 300 YFLNNEGSAS GKSKPKVKRS QKRRKKAAHK TDDQFEDDRE ACSGTEEGCS SRKAKDISDL 360 DVFGSKGSWP SNKSNKRSRQ LFFGDELSAL DALHTLADIS VNILQPSSIA ESESSAQFKD 420 GSKDNESDDK PSVPAAVSLF DKKDKPRKTK KIKRQSEIAS NEVVTRKKAR LSKDHHHDGS 480 TSDVKQDDCK CGVKMEKKKR KSSTLKISKD EKNTLKDSEK TEASAEEGKV SSNKGRHTHV 540 SPVSKQNKSK AQESSPAHAD FGKEAMDTVD MTENAITQQS DSASKSKSRR KLGILKALAP 600 ESKPAEGADD SCDNVSYPVN NVAELKDKLS HCLSSRFLRR WCMSEWFYSA IDYPWFAKSE 660 FVEYLNHVKL GHVPRLTRVE WGVIRRSVIF SCLVCFCFVC FSESTVLQFS WKATSIVKAV 720 FTRGEGKAFS VSRVSQTTLC

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence

MSSTRKVRNV NKRYAKINED WPEKDATVVH KNKVRKKKLS DLGSQWSKDE LERFYAAYRK  60
YGKDWRKVAG AVHDRTSDMV EALYNMNRAY LSLPEGTATA AGLIAMMTDH YNILDGSNSD  120
HESNGSPKTS RKPQKRGRAK LQSVSKASDT RYPDLLQSQP ASSSYGCLSL LKKKRSGGNK  180
PRAVGKRTPR VPVASMYRDD KIGPSNRQAK PDANNGDEEG ALAALALAEV CQRGSPQVSQ  240
TSGRSSGQMF LSPGKSIDRK NADSEMGSSK MHGFQVDADY PEGSLGSREA ETGDYPKDAS  300
YFLNNEGSAS GKSKPKVKRS QKRRKKAAHK TDDQFEDDRE ACSGTEEGCS SRKAKDISDL  360
DVFGSKGSWP SNKSNKRSRQ LFFGDELSAL DALHTLADIS VNILQPSSIA ESESSAQFKD  420
GSKDNESDDK PSVPAAVSLF DKKDKPRKTK KIKRQSEIAS NEVVTRKKAR LSKDHHHDGS  480
TSDVKQDDCK CGVKMEKKKR KSSTLKISKD EKNTLKDSEK TEASAEEGKV SSNKGRHTHV  540
SPVSKQNKSK AQESSPAHAD FGKEAMDTVD MTENAITQQS DSASKSKSRR KLGILKALAP  600
ESKPAEGADD SCDNVSYPVN NVAELKDKLS HCLSSRFLRR WCMSEWFYSA IDYPWFAKSE  660
FVEYLNHVKL GHVPRLTRVE WGVIRRSVIF SCLVCFCFVC FSESTVLQFS WKATSIVKAV  720
FTRGEGKAFS VSRVSQTTLC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	314	326	KPKVKRSQKRRKK
2	317	323	VKRSQKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	1e-103	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG000810.11