PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG000390.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 77aa    MW: 9220.91 Da    PI: 10.9802
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG000390.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF53.43.4e-171043235
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaev 35
                      rie+ s rqvtfskRr+g+lKK  EL +LC+++v
  TRIDC5AG000390.1 10 RIEDMSSRQVTFSKRRHGLLKKTRELAILCNVQV 43
                      8********************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 77 aa     Download sequence    
MVRGKIVIRR IEDMSSRQVT FSKRRHGLLK KTRELAILCN VQVGCHRLLP YWPHLRTKNF  60
QKYYQYNEKL CVLNGST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.19e-18MIKC_MADS family protein