PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG062820.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 270aa    MW: 29177.5 Da    PI: 5.9234
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG062820.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind102.43.9e-32211132103
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       F+ k+y +++d++++ ++ w   gnsfvv d+  f++ +Lp +Fkh nf+SFvRQLn+YgF+kv+ ++         weF+h sF +g+++ll
  TRIDC4BG062820.1  21 FVAKTYGMVDDRATDAVVAWGPAGNSFVVADPFAFSRALLPAHFKHANFSSFVRQLNTYGFRKVDPDR---------WEFAHASFLRGQTHLL 104
                       9****************************************************************999.........**************** PP

                       XXXXXXXXX CS
      HSF_DNA-bind  95 ekikrkkse 103
                        +i r++s+
  TRIDC4BG062820.1 105 PRIVRRQSS 113
                       ******987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
GGMDSSSSSS SGTGGSGAAP FVAKTYGMVD DRATDAVVAW GPAGNSFVVA DPFAFSRALL  60
PAHFKHANFS SFVRQLNTYG FRKVDPDRWE FAHASFLRGQ THLLPRIVRR QSSKRGKDSR  120
EEEEEESSSA ALAMEVVRLR KEQRATEERV AEMWRRVQET ERRPKQMLAF LLKVVGDPDV  180
LRRLAGGPGS GGGPDEGAEE VKRPRLLLDG DGAGVDGGLL YHHSGNLMNL GEALVPEEPS  240
VDMYYAGGDG FGGVQADGGP PYAFHMDTGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.14e-60HSF family protein