PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG062640.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HSF | ||||||||
Protein Properties | Length: 299aa MW: 33861.7 Da PI: 10.9312 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 100.8 | 1.3e-31 | 11 | 102 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 F+ k+y +++d++++ ++ w +nsfvv d+ f++ +Lp +Fkhsnf+SFvRQLn+YgF+kv+ ++ weF+h F +g+++ll TRIDC4BG062640.3 11 FVAKTYAMVDDPATDAVVGWGPASNSFVVADPFAFSEMLLPAHFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFAHACFLRGQTHLL 94 9********************999*****************************************999.........**************** PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 +i r++s TRIDC4BG062640.3 95 PRIVRRRS 102 ***99976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MSSGGGMVAP FVAKTYAMVD DPATDAVVGW GPASNSFVVA DPFAFSEMLL PAHFKHSNFS 60 SFVRQLNTYG FRKVDPDRWE FAHACFLRGQ THLLPRIVRR RSGGKRGKED ADEEDDDIST 120 KMLAMEVVRL KEEQRATEDR LAAMWRRVQD AERRPKLMLA FLLKVVGDPD VLRRLVGNSG 180 CNDGLFPGEG AEAKRPRLLL DGEAQVSKKK MRVDGDGLLY GINRQEAFVR EPRVDFTGFY 240 TGEGVSPTPH RQWSPDAGRL HGGTRGRLHW VLHRRRRVQR RAGGRRPAVR FPLERRRLL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 265 | 277 | RGRLHWVLHRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24520.1 | 4e-65 | HSF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG062640.3 |