PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG062640.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HSF | ||||||||
Protein Properties | Length: 136aa MW: 15095 Da PI: 7.6318 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 103.5 | 1.8e-32 | 12 | 103 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 F+ k+y +++d++++ ++ w +nsfvv d+ f++ +Lp +Fkhsnf+SFvRQLn+YgF+kv+ ++ weF+h F +g+++ll TRIDC4BG062640.2 12 FVAKTYAMVDDPATDAVVGWGPASNSFVVADPFAFSEMLLPAHFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFAHACFLRGQTHLL 95 9********************999*****************************************999.........**************** PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 +i r++s TRIDC4BG062640.2 96 PRIVRRRS 103 ****9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence |
KMSSGGGMVA PFVAKTYAMV DDPATDAVVG WGPASNSFVV ADPFAFSEML LPAHFKHSNF 60 SSFVRQLNTY GFRKVDPDRW EFAHACFLRG QTHLLPRIVR RRSGGKRGKE DADEEDDDIS 120 TKMRDATNQT LHTAPC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24520.1 | 8e-50 | HSF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG062640.2 |