PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG062140.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 364aa    MW: 37694.4 Da    PI: 7.327
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG062140.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.57.6e-18264298135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++C + kTp+WR gp g+ktLCnaCG++y++ +l
  TRIDC4BG062140.1 264 CTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRL 298
                       *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MAPEWEAALG MELGMGSHYH HAPPSAAASP MNHHHHHHHH HSAYSHSQPP HQYNFYGGAA  60
GGDGAADPMR VDEMLDLSSH LGAHDFFSGA NNGAADNAPA PPAAAAASSS DHQHHHPSSF  120
NLSFADEFYL PVPTEEAAEL EWLSNFVDDS YPDIPNYPPA VQAAMAAAAR NGGVVVKQEN  180
SASAAAPGRG ARSKRSRAVS AAAAAWHALA PRQPSPSSSS SSSDSKPARS GGGGGGGGVK  240
KSGLVVGAAE LGGGGDQSGE VRRCTHCASE KTPQWRTGPL GPKTLCNACG VRYKSGRLVP  300
EYRPAASPTF VLTQHSNSHR KVMELRRQNE LVHLRGGVGG AGVVSASSGS GGAAEHMFRD  360
YGVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.14e-43GATA family protein