PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG061460.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 642aa    MW: 67638.6 Da    PI: 6.3786
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG061460.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS304.52.5e-932816412374
              GRAS   2 velLlecAeavssgdlelaqalLarlsel...aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                       v++L+e+A+ v++gd+  a+++Larl+++   a  +g+p+ R a+yf+eAL+  l  ++ + ++a  +s+    ++  +l a+k+fse+sP+l
  TRIDC4BG061460.1 281 VDQLTEAARLVEAGDAYGAREILARLNHRlpaAPAAGTPLLRSAFYFKEALSVALDTTGAHASSAAVASTP--VDVLLKLGAYKAFSELSPVL 371
                       689*************************999455566********************77777776655555..5799**************** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       +f+h+t+ qa+l+++ g+ ++H++Dfdi+ G QW++L+q+La+R+   + l++T+++ p++++  el+ ++e+La+fA+elgvpf+f v+   
  TRIDC4BG061460.1 372 QFAHFTCVQAVLDELGGAGCIHVLDFDIGVGEQWASLMQELAQRRP-GAALKVTALVLPSTHHPLELQLIHENLANFAAELGVPFQFVVF--- 460
                       *******************************************965.589**************************************98... PP

              GRAS 185 rledleleeL.rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                       +l+++++ eL ++  g+a+aV+l +   +      +     ++vL+lv++l +k+v+ v++  d+++ +F++++l+a++ ++ l++sl+a  +
  TRIDC4BG061460.1 461 NLDSVDPTELlAIAGGDAIAVHLPVGSVHAA----A----VPSVLHLVRRLGAKLVISVDRSGDRGELPFAAHLLQAFQSCAFLLESLDAV-G 544
                       899998877637777**********998887....4....456*********************************************998.7 PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       +e + ++k+Er+l++++i+++v  ++++  +   +l  Wr ++++aGF pv++s++a++qa++ll+kv+++g+rve++ gslvl W++ +Lvs
  TRIDC4BG061460.1 545 TEPDVASKIERFLIQPKIESCVIRRHQA-AAAGDKLLPWRTMFTSAGFVPVHISNFAEAQADSLLKKVPVRGFRVEKRAGSLVLHWQRAELVS 636
                       888***********************99.888889********************************************************** PP

              GRAS 370 vSaWr 374
                       vSaWr
  TRIDC4BG061460.1 637 VSAWR 641
                       ****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 642 aa     Download sequence    
MPTQQLTTFQ LLPPAHAHGD RRQYQHQHQQ QQLACGGGGG GLWDPASVLD RRASPAAHPT  60
LSSPSSLPAG VAALAKNVSA APPAQAQAQA WPPPPDDDAK DDWVHHLPPL DMAGWGDPHA  120
AAMQDQGQGH PHPPPSSQDS TFLRWIIGGG DDDDDDDGSG PAMDGADPPD LDLDRITMLP  180
RHPPLMGGAG HGLPFTLAGE DAKQQFRPSP GAALHQQQHH LPHAFHGGAF PSFDAPAPAK  240
RHPMAGAAPP KLAPFAGHGA AAALKPKAEA PADDGAAAAA VDQLTEAARL VEAGDAYGAR  300
EILARLNHRL PAAPAAGTPL LRSAFYFKEA LSVALDTTGA HASSAAVAST PVDVLLKLGA  360
YKAFSELSPV LQFAHFTCVQ AVLDELGGAG CIHVLDFDIG VGEQWASLMQ ELAQRRPGAA  420
LKVTALVLPS THHPLELQLI HENLANFAAE LGVPFQFVVF NLDSVDPTEL LAIAGGDAIA  480
VHLPVGSVHA AAVPSVLHLV RRLGAKLVIS VDRSGDRGEL PFAAHLLQAF QSCAFLLESL  540
DAVGTEPDVA SKIERFLIQP KIESCVIRRH QAAAAGDKLL PWRTMFTSAG FVPVHISNFA  600
EAQADSLLKK VPVRGFRVEK RAGSLVLHWQ RAELVSVSAW RC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.12e-83GRAS family protein