PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG061070.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 123aa    MW: 14352.3 Da    PI: 11.3872
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG061070.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.14.2e-104284552
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS
               HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52
                      + ++Er RR+r+N+++  +r+++P+      +K++Ka+i + A+ YI 
  TRIDC4BG061070.1 42 KIINERHRRRRLNEKLYAIRRVVPNI-----TKMDKASIIQDAIAYIE 84
                      4799*********************7.....7***************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MDCWSMHLPA EDSLSGLYDD STSSPDGATS RPTKVTSLER RKIINERHRR RRLNEKLYAI  60
RRVVPNITKM DKASIIQDAI AYIEERRILA ALQLRSHGHG GGRRLDRQRG ARRWRHYPKQ  120
TFS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14052RRKIINERHRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.12e-14bHLH family protein