PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG055620.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 346aa MW: 37114.7 Da PI: 4.8347

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG055620.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.7	7.7e-12	176	223	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 r ++ ++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+++L TRIDC4BG055620.3 176 RSKNLMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYVNEL 223 677889********************66......*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
DQLDEQSFLD ELMSLRRDEA PVPAPAPWQA YPASGMMTTS DLLFYGGEGA AEASSGMDLA 60 GPFQQPMAPP PAAPPHRPHE EFNFDCLSEV CNPYRSCAGG GVPGPGVVNA AGQAYALHDA 120 MAEDHPSCGN LDHGGGSSSS PVPFVFGAGG AGETSEMTRG VFSGGHPRSK LNRGTRSKNL 180 MAERRRRKRL NDRLSMLRSI VPKISKMDRT SILGDTIDYV NELTERIKEI GATPEELNLL 240 NTRKNFSSGS SEEMAMRNST KFVIEKQGDG EMRIDMCCAT SPGVLISTVS ALEVLGLEIE 300 QCVVSCFGDF AMQASCSQEE GRSRVTSTDE IKQALFTSVG YGGRCL

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

DQLDEQSFLD ELMSLRRDEA PVPAPAPWQA YPASGMMTTS DLLFYGGEGA AEASSGMDLA  60
GPFQQPMAPP PAAPPHRPHE EFNFDCLSEV CNPYRSCAGG GVPGPGVVNA AGQAYALHDA  120
MAEDHPSCGN LDHGGGSSSS PVPFVFGAGG AGETSEMTRG VFSGGHPRSK LNRGTRSKNL  180
MAERRRRKRL NDRLSMLRSI VPKISKMDRT SILGDTIDYV NELTERIKEI GATPEELNLL  240
NTRKNFSSGS SEEMAMRNST KFVIEKQGDG EMRIDMCCAT SPGVLISTVS ALEVLGLEIE  300
QCVVSCFGDF AMQASCSQEE GRSRVTSTDE IKQALFTSVG YGGRCL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	183	190	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	6e-57	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG055620.3